Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm26303-201ENSMUST00000116845 119 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm11862-201ENSMUST00000119678 659 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm13396-201ENSMUST00000120617 271 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm23106-201ENSMUST00000157554 101 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Rnu7-201ENSMUST00000158458 62 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm27656-201ENSMUST00000185055 80 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm37319-201ENSMUST00000193500 636 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm37089-201ENSMUST00000195616 129 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Gm17990-201ENSMUST00000211728 553 ntBASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.22□□□□□ -2.37
Trav12-1A0N8R1 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm14913-201ENSMUST00000120011 1093 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm23317-201ENSMUST00000157999 129 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm24678-201ENSMUST00000158756 104 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Mir5104-201ENSMUST00000175319 94 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm18667-201ENSMUST00000186523 484 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm37869-201ENSMUST00000193385 595 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm44429-201ENSMUST00000203542 186 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm25138-201ENSMUST00000083248 136 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.21□□□□□ -2.38
Trav12-1A0N8R1 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm24773-201ENSMUST00000158513 99 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm22403-201ENSMUST00000174919 84 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm26116-201ENSMUST00000175600 77 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm27421-201ENSMUST00000184729 167 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm28435-201ENSMUST00000185496 108 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm43026-201ENSMUST00000202972 325 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm11351-202ENSMUST00000225724 478 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm25357-201ENSMUST00000082745 72 ntBASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Trav12-1A0N8R1 Gm42736-201ENSMUST00000200723 1353 ntBASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 Mir374b-201ENSMUST00000102314 95 ntBASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 Gm12806-201ENSMUST00000119384 268 ntBASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 Gm16359-201ENSMUST00000124511 289 ntBASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 Gm26358-201ENSMUST00000158215 97 ntBASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 Gm42719-201ENSMUST00000197393 355 ntBASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 Gm43914-201ENSMUST00000203592 594 ntBASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 Gm40810-201ENSMUST00000219149 253 ntBASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.19□□□□□ -2.38
Trav12-1A0N8R1 Gm26147-201ENSMUST00000104479 114 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm23435-201ENSMUST00000157183 156 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm22221-201ENSMUST00000157362 103 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm26487-201ENSMUST00000158022 94 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm23340-201ENSMUST00000158955 123 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm27717-201ENSMUST00000183933 151 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm29661-201ENSMUST00000186781 315 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm29308-201ENSMUST00000188863 315 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm44088-201ENSMUST00000204595 237 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm34783-201ENSMUST00000209159 303 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm45704-201ENSMUST00000212582 403 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm24977-201ENSMUST00000083106 163 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.18□□□□□ -2.38
Trav12-1A0N8R1 Gm11219-201ENSMUST00000118565 358 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm12889-201ENSMUST00000118684 241 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm22765-201ENSMUST00000158371 128 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Mir15a-201ENSMUST00000175266 84 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Mir6411-201ENSMUST00000183556 108 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Mir6389-201ENSMUST00000183661 102 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm20257-202ENSMUST00000188643 130 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm43602-201ENSMUST00000196772 300 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm46997-201ENSMUST00000222108 217 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm22972-201ENSMUST00000083297 131 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm23733-201ENSMUST00000083750 106 ntBASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.17□□□□□ -2.38
Trav12-1A0N8R1 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 268 ms