Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Mir6341-201ENSMUST00000183490 121 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm18357-201ENSMUST00000188184 580 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm44337-201ENSMUST00000196553 114 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm43578-201ENSMUST00000201250 459 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm45402-201ENSMUST00000211796 223 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm25896-201ENSMUST00000083713 136 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.42□□□□□ -2.18
Trbv20A0A0B4J1H5 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm15067-201ENSMUST00000119534 156 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm11522-201ENSMUST00000120533 176 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm15899-201ENSMUST00000128586 238 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm26181-201ENSMUST00000157687 106 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm24419-201ENSMUST00000157875 332 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm17148-201ENSMUST00000164702 249 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm18453-201ENSMUST00000208000 626 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm24151-201ENSMUST00000082758 141 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.41□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm24079-201ENSMUST00000104352 132 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm25529-201ENSMUST00000104850 92 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm22713-201ENSMUST00000116895 130 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm24895-201ENSMUST00000122742 74 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Trav20-201ENSMUST00000142754 347 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm22963-201ENSMUST00000157960 91 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm23858-201ENSMUST00000158384 106 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm23022-201ENSMUST00000158768 180 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm45403-201ENSMUST00000209453 276 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm20102-201ENSMUST00000222445 220 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm22299-201ENSMUST00000082663 136 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm22683-201ENSMUST00000082854 137 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Mir340-201ENSMUST00000083483 98 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm10360-201ENSMUST00000097219 272 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.4□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm26396-201ENSMUST00000104093 132 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm23175-201ENSMUST00000104371 132 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm24982-201ENSMUST00000104456 132 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm11386-201ENSMUST00000117761 347 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm14678-201ENSMUST00000121396 482 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm16038-201ENSMUST00000159317 193 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Snord87-201ENSMUST00000175437 87 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm19932-201ENSMUST00000177033 313 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm29005-201ENSMUST00000186773 320 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm45365-201ENSMUST00000209489 256 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm8125-201ENSMUST00000216602 738 ntBASIC1.39□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm25543-201ENSMUST00000122678 312 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm23718-201ENSMUST00000157350 307 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 U6.1-201ENSMUST00000157443 101 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm22555-201ENSMUST00000157801 62 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm24726-201ENSMUST00000158232 121 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm26401-201ENSMUST00000158502 76 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Cfap61-214ENSMUST00000167179 183 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Mir3086-201ENSMUST00000175072 87 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm21885-201ENSMUST00000178891 327 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm27539-201ENSMUST00000184971 224 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm44429-201ENSMUST00000203542 186 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm44655-201ENSMUST00000207768 423 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm26066-201ENSMUST00000083385 109 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm26314-201ENSMUST00000083891 107 ntBASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm22656-201ENSMUST00000104199 171 ntBASIC1.37□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm11854-201ENSMUST00000117839 446 ntBASIC1.37□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm14269-201ENSMUST00000120455 306 ntBASIC1.37□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm11835-201ENSMUST00000120635 663 ntBASIC1.37□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm15115-201ENSMUST00000121145 264 ntBASIC1.37□□□□□ -2.19
Trbv20A0A0B4J1H5 Gm24598-201ENSMUST00000122510 74 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms