Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 Gm36953-201ENSMUST00000195295 268 ntBASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 Gm43723-201ENSMUST00000196886 189 ntBASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 Gm43865-201ENSMUST00000204721 127 ntBASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 Gm45403-201ENSMUST00000209453 276 ntBASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Cldn3Q9Z0G9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm22494-201ENSMUST00000104495 128 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm12235-201ENSMUST00000118596 170 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm22308-201ENSMUST00000177609 107 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm21815-201ENSMUST00000178213 664 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm20874-201ENSMUST00000178356 663 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm23191-201ENSMUST00000179147 107 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm25457-201ENSMUST00000179509 107 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm27991-201ENSMUST00000184804 137 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm27959-201ENSMUST00000185172 111 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm42570-201ENSMUST00000195937 292 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm44938-201ENSMUST00000208614 427 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm18991-201ENSMUST00000209225 746 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm25801-201ENSMUST00000082638 106 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm22997-201ENSMUST00000082845 107 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm26056-201ENSMUST00000083043 104 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm23246-201ENSMUST00000083371 67 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Cldn3Q9Z0G9 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm24892-201ENSMUST00000122747 104 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm25625-201ENSMUST00000157221 96 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm25054-201ENSMUST00000157370 97 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm24388-201ENSMUST00000177872 107 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm9830-201ENSMUST00000178509 357 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Mir6901-201ENSMUST00000185062 62 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm18356-201ENSMUST00000185677 623 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm44182-201ENSMUST00000204052 115 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm44794-201ENSMUST00000206550 411 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Gm26265-201ENSMUST00000083277 135 ntBASIC1.95□□□□□ -2.1
Cldn3Q9Z0G9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm12646-201ENSMUST00000119144 238 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm14215-201ENSMUST00000120578 221 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm25269-201ENSMUST00000122601 104 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm22227-201ENSMUST00000157356 259 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm25486-201ENSMUST00000158726 63 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm21978-201ENSMUST00000179696 377 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm23186-201ENSMUST00000180078 107 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm27979-201ENSMUST00000185126 56 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm28211-201ENSMUST00000190920 315 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm38050-201ENSMUST00000191904 238 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm42672-201ENSMUST00000197821 352 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm44881-201ENSMUST00000205425 367 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Gm40810-201ENSMUST00000219149 253 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.94□□□□□ -2.1
Cldn3Q9Z0G9 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Mir701-201ENSMUST00000102208 109 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm24338-201ENSMUST00000104205 127 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Trav20-201ENSMUST00000142754 347 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Snord11-201ENSMUST00000158468 84 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm23548-201ENSMUST00000158963 106 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm24085-201ENSMUST00000175172 116 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Mir6355-201ENSMUST00000183687 106 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm3724-201ENSMUST00000197957 349 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Gm26066-201ENSMUST00000083385 109 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Mir322-201ENSMUST00000083484 95 ntBASIC1.93□□□□□ -2.1
Cldn3Q9Z0G9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Cldn3Q9Z0G9 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.92□□□□□ -2.1
Cldn3Q9Z0G9 Gm22678-201ENSMUST00000116974 101 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms