Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm23342-201ENSMUST00000158958 115 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Mir6995-201ENSMUST00000183658 71 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Mir6355-201ENSMUST00000183687 106 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm27722-201ENSMUST00000183908 76 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm27443-201ENSMUST00000184660 98 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm45375-201ENSMUST00000210338 280 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm45730-201ENSMUST00000212560 395 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm26265-201ENSMUST00000083277 135 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm24481-201ENSMUST00000157210 102 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm25384-201ENSMUST00000157807 105 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm22727-201ENSMUST00000158090 116 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Mir6379-201ENSMUST00000183392 115 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm18356-201ENSMUST00000185677 623 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm40810-201ENSMUST00000219149 253 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm25579-201ENSMUST00000083407 106 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm24412-201ENSMUST00000083426 109 ntBASIC1.85□□□□□ -2.11
Trim3Q9R1R2 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trim3Q9R1R2 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Gm13672-201ENSMUST00000117554 459 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Gm11359-201ENSMUST00000120039 567 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Gm25488-201ENSMUST00000158728 118 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Gm21754-201ENSMUST00000177550 479 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Mir6997-201ENSMUST00000184313 71 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Gm44465-201ENSMUST00000199536 114 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Gm45315-201ENSMUST00000209283 333 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Gm26457-201ENSMUST00000082678 78 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Gm24151-201ENSMUST00000082758 141 ntBASIC1.84□□□□□ -2.11
Trim3Q9R1R2 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trim3Q9R1R2 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm13885-201ENSMUST00000117569 187 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm24892-201ENSMUST00000122747 104 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm16328-201ENSMUST00000126985 196 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 U6.1-201ENSMUST00000157443 101 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm25888-201ENSMUST00000157778 302 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm22654-201ENSMUST00000157874 105 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm24211-201ENSMUST00000158264 107 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm21815-201ENSMUST00000178213 664 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm20874-201ENSMUST00000178356 663 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm27317-201ENSMUST00000183533 95 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Mir6399-201ENSMUST00000184050 84 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Mir6901-201ENSMUST00000185062 62 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm27979-201ENSMUST00000185126 56 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm28058-201ENSMUST00000186421 264 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm42570-201ENSMUST00000195937 292 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm18453-201ENSMUST00000208000 626 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm25124-201ENSMUST00000083345 164 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.83□□□□□ -2.12
Trim3Q9R1R2 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm25269-201ENSMUST00000122601 104 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm23557-201ENSMUST00000157820 138 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm24053-201ENSMUST00000158620 105 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm25711-201ENSMUST00000158633 128 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm26157-201ENSMUST00000158974 126 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm24573-201ENSMUST00000175499 112 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm22800-201ENSMUST00000175627 94 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm19932-201ENSMUST00000177033 313 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm9830-201ENSMUST00000178509 357 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm43367-201ENSMUST00000199986 625 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm2829-201ENSMUST00000213121 499 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms