Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.91□□□□□ -2.1
Scn5aQ9JJV9 Gm43286-201ENSMUST00000197420 424 ntBASIC1.91□□□□□ -2.1
Scn5aQ9JJV9 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.91□□□□□ -2.1
Scn5aQ9JJV9 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.91□□□□□ -2.1
Scn5aQ9JJV9 Snord42a-201ENSMUST00000082606 65 ntBASIC1.91□□□□□ -2.1
Scn5aQ9JJV9 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.91□□□□□ -2.1
Scn5aQ9JJV9 Gm23096-201ENSMUST00000083447 107 ntBASIC1.91□□□□□ -2.1
Scn5aQ9JJV9 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.9□□□□□ -2.1
Scn5aQ9JJV9 Gm22761-201ENSMUST00000102278 96 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm13355-201ENSMUST00000117996 317 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm14013-201ENSMUST00000119006 270 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm17161-201ENSMUST00000169187 524 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Mir6341-201ENSMUST00000183490 121 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm37128-201ENSMUST00000192599 232 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm45704-201ENSMUST00000212582 403 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm6109-201ENSMUST00000223297 348 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm22061-201ENSMUST00000082557 107 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm22978-201ENSMUST00000082607 160 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm23422-201ENSMUST00000102000 107 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm42606-201ENSMUST00000114209 239 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm24907-201ENSMUST00000116932 128 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm7164-201ENSMUST00000117503 450 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm24379-201ENSMUST00000122695 86 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm26278-201ENSMUST00000157098 132 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm22083-201ENSMUST00000157586 102 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm25162-201ENSMUST00000158906 159 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Gm29350-201ENSMUST00000189141 541 ntBASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Scn5aQ9JJV9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Mir687-201ENSMUST00000102166 89 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm12646-201ENSMUST00000119144 238 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm24997-201ENSMUST00000157910 105 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm22389-201ENSMUST00000158193 301 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm8114-201ENSMUST00000172225 484 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm24084-201ENSMUST00000175173 137 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Mir6346-201ENSMUST00000183982 81 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Trbv6-201ENSMUST00000193743 276 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm43284-201ENSMUST00000200103 253 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm43978-201ENSMUST00000203491 451 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm45375-201ENSMUST00000210338 280 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm22974-201ENSMUST00000083301 103 ntBASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Scn5aQ9JJV9 Gm14624-201ENSMUST00000117746 192 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm15497-201ENSMUST00000119137 551 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm13913-201ENSMUST00000121126 260 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm12872-201ENSMUST00000121835 320 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm14530-201ENSMUST00000122391 333 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm22434-201ENSMUST00000158549 122 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm24878-201ENSMUST00000158782 104 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm7953-201ENSMUST00000168278 469 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm25121-201ENSMUST00000179846 79 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm26914-201ENSMUST00000182262 223 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Mir8116-201ENSMUST00000184134 97 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Mir7215-201ENSMUST00000200383 51 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm44938-201ENSMUST00000208614 427 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm23517-201ENSMUST00000082830 192 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm25124-201ENSMUST00000083345 164 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm23246-201ENSMUST00000083371 67 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm12550-201ENSMUST00000118478 329 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm15183-201ENSMUST00000118933 348 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm14588-201ENSMUST00000119895 172 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm24481-201ENSMUST00000157210 102 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm18356-201ENSMUST00000185677 623 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm44324-201ENSMUST00000198517 135 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Gm26457-201ENSMUST00000082678 78 ntBASIC1.88□□□□□ -2.11
Scn5aQ9JJV9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 Gm6954-201ENSMUST00000117416 225 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 Gm11386-201ENSMUST00000117761 347 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 Gm24846-201ENSMUST00000158033 108 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 Gm24076-201ENSMUST00000158179 94 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 Gm44825-201ENSMUST00000207557 150 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 Gm44598-201ENSMUST00000207566 150 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 Gm23242-201ENSMUST00000083055 107 ntBASIC1.87□□□□□ -2.11
Scn5aQ9JJV9 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms