Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm25308-201ENSMUST00000104171 158 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm13581-201ENSMUST00000120675 278 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm24787-201ENSMUST00000157380 123 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm25711-201ENSMUST00000158633 128 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm29147-201ENSMUST00000186846 315 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm29227-201ENSMUST00000187139 315 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm29034-201ENSMUST00000188099 315 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm28160-201ENSMUST00000191229 315 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm37801-201ENSMUST00000194754 274 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm37129-201ENSMUST00000195791 315 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm37331-201ENSMUST00000192367 3375 ntBASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ddx56Q9D0R4 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm15526-201ENSMUST00000112504 204 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm22322-201ENSMUST00000157151 111 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm22814-201ENSMUST00000157452 104 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm28314-201ENSMUST00000191276 345 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm37763-201ENSMUST00000193445 120 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm43217-201ENSMUST00000199513 367 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Mir7215-201ENSMUST00000200383 51 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm43264-201ENSMUST00000202284 325 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm45005-201ENSMUST00000206640 157 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm44666-201ENSMUST00000208544 391 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm9370-201ENSMUST00000222787 609 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 AC163295.1-201ENSMUST00000227840 314 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm23970-201ENSMUST00000083319 107 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Gm23845-201ENSMUST00000083834 152 ntBASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ddx56Q9D0R4 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm26473-201ENSMUST00000116763 127 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm14973-201ENSMUST00000117248 255 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm12351-201ENSMUST00000118727 292 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm11606-201ENSMUST00000120706 617 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm25805-201ENSMUST00000122788 108 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm24813-201ENSMUST00000175310 84 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm27997-201ENSMUST00000184942 69 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm29490-201ENSMUST00000190923 342 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm37007-201ENSMUST00000194234 319 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm23378-201ENSMUST00000082942 107 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm26126-201ENSMUST00000083188 164 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ddx56Q9D0R4 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Gm23941-201ENSMUST00000101953 107 ntBASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Gm24403-201ENSMUST00000104616 130 ntBASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Gm13992-201ENSMUST00000120558 156 ntBASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Gm12926-201ENSMUST00000121158 409 ntBASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Gm16111-201ENSMUST00000162128 285 ntBASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Gm28169-201ENSMUST00000190342 345 ntBASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Gm44903-201ENSMUST00000206840 130 ntBASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ddx56Q9D0R4 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm11572-201ENSMUST00000119164 120 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm12924-201ENSMUST00000121747 318 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm24598-201ENSMUST00000122510 74 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm26277-201ENSMUST00000157097 152 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm24053-201ENSMUST00000158620 105 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm28951-201ENSMUST00000190742 313 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 Mir3535-201ENSMUST00000197651 147 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm44564-201ENSMUST00000207985 180 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 AC159709.1-201ENSMUST00000220445 349 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 CT033785.1-201ENSMUST00000224872 272 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 AF357428-201ENSMUST00000083815 69 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm37096-201ENSMUST00000192317 2058 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ddx56Q9D0R4 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ddx56Q9D0R4 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm25466-201ENSMUST00000103995 132 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm24280-201ENSMUST00000104237 134 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Mir1b-201ENSMUST00000117012 122 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm15272-201ENSMUST00000120865 233 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms