Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Scrt1Q99M85 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Scrt1Q99M85 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Scrt1Q99M85 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm13439-201ENSMUST00000117541 409 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm11936-201ENSMUST00000118323 160 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm14940-201ENSMUST00000119309 495 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm12785-201ENSMUST00000122052 172 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm27926-201ENSMUST00000157180 66 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm23120-201ENSMUST00000157654 287 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm26411-201ENSMUST00000157668 107 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm23223-201ENSMUST00000158119 127 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm27510-201ENSMUST00000158214 64 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Mir6335-201ENSMUST00000184081 98 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm29397-201ENSMUST00000185205 333 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Scrt1Q99M85 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm34073-201ENSMUST00000195736 212 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm43722-201ENSMUST00000196054 124 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm43286-201ENSMUST00000197420 424 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm46389-201ENSMUST00000223199 392 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm23451-201ENSMUST00000083328 122 ntBASIC2.1□□□□□ -2.07
Scrt1Q99M85 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Scrt1Q99M85 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Scrt1Q99M85 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Scrt1Q99M85 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm23142-201ENSMUST00000101848 105 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm26240-201ENSMUST00000101893 105 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm13396-201ENSMUST00000120617 271 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm24601-201ENSMUST00000157970 143 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm24729-201ENSMUST00000158225 137 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm22839-201ENSMUST00000158436 304 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm22621-201ENSMUST00000179678 74 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm27402-201ENSMUST00000183890 120 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm28755-201ENSMUST00000185773 199 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm29429-201ENSMUST00000187071 121 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm9696-202ENSMUST00000191541 830 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm43284-201ENSMUST00000200103 253 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm35931-201ENSMUST00000203931 448 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.09□□□□□ -2.07
Scrt1Q99M85 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Scrt1Q99M85 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 Mir10a-201ENSMUST00000083585 110 ntBASIC2.09□□□□□ -2.07
Scrt1Q99M85 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Scrt1Q99M85 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
Scrt1Q99M85 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Scrt1Q99M85 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Scrt1Q99M85 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm13378-201ENSMUST00000117483 336 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm16242-201ENSMUST00000117741 334 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm15223-201ENSMUST00000120989 826 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm13913-201ENSMUST00000121126 260 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm23704-201ENSMUST00000158844 340 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm16289-201ENSMUST00000162079 183 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm24085-201ENSMUST00000175172 116 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Mir6338-201ENSMUST00000183389 109 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm43955-201ENSMUST00000204332 142 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm19563-201ENSMUST00000222031 270 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Scrt1Q99M85 Gm23055-201ENSMUST00000082805 94 ntBASIC2.08□□□□□ -2.08
Scrt1Q99M85 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Scrt1Q99M85 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Scrt1Q99M85 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Scrt1Q99M85 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm26256-201ENSMUST00000122499 186 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm24839-201ENSMUST00000122602 107 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm26275-201ENSMUST00000157101 268 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm23557-201ENSMUST00000157820 138 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm25718-201ENSMUST00000158632 118 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.07□□□□□ -2.08
Scrt1Q99M85 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm29665-201ENSMUST00000191457 528 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.07□□□□□ -2.08
Scrt1Q99M85 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm19177-201ENSMUST00000204520 613 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm45403-201ENSMUST00000209453 276 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm45313-201ENSMUST00000210584 178 ntBASIC2.07□□□□□ -2.08
Scrt1Q99M85 Gm8940-201ENSMUST00000212585 219 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms