Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Clp1Q99LI9 Gm27793-201ENSMUST00000183405 76 ntBASIC3.83□□□□□ -1.8
Clp1Q99LI9 Gm29574-201ENSMUST00000186226 696 ntBASIC3.83□□□□□ -1.8
Clp1Q99LI9 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.83□□□□□ -1.8
Clp1Q99LI9 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.83□□□□□ -1.8
Clp1Q99LI9 Gm9174-201ENSMUST00000078149 255 ntBASIC3.83□□□□□ -1.8
Clp1Q99LI9 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.83□□□□□ -1.8
Clp1Q99LI9 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.83□□□□□ -1.8
Clp1Q99LI9 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Clp1Q99LI9 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Clp1Q99LI9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Clp1Q99LI9 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Clp1Q99LI9 Gm43993-201ENSMUST00000203972 247 ntBASIC3.82□□□□□ -1.8
Clp1Q99LI9 Gm24625-201ENSMUST00000082622 130 ntBASIC3.82□□□□□ -1.8
Clp1Q99LI9 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
Clp1Q99LI9 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Clp1Q99LI9 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Clp1Q99LI9 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.82□□□□□ -1.8
Clp1Q99LI9 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.81□□□□□ -1.8
Clp1Q99LI9 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm13443-201ENSMUST00000120770 555 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm13797-201ENSMUST00000121792 120 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm15365-201ENSMUST00000122392 300 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm22956-201ENSMUST00000122520 80 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm24440-201ENSMUST00000157236 63 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm25012-201ENSMUST00000158396 164 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm22890-201ENSMUST00000158642 144 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm24512-201ENSMUST00000174963 65 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm28924-201ENSMUST00000190012 241 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm45006-201ENSMUST00000206078 690 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm45317-201ENSMUST00000210385 223 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Snora19-201ENSMUST00000082962 132 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm23658-201ENSMUST00000083233 132 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Clp1Q99LI9 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Clp1Q99LI9 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.81□□□□□ -1.8
Clp1Q99LI9 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Clp1Q99LI9 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
Clp1Q99LI9 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Clp1Q99LI9 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm22023-201ENSMUST00000104354 130 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm24936-201ENSMUST00000122598 247 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.8□□□□□ -1.8
Clp1Q99LI9 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm23753-201ENSMUST00000157575 149 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm25223-201ENSMUST00000158200 110 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Clp1Q99LI9 Mir669k-201ENSMUST00000177742 127 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm25673-201ENSMUST00000179957 127 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm37918-201ENSMUST00000192071 120 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm44476-201ENSMUST00000196225 91 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm43932-201ENSMUST00000204499 52 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm45445-201ENSMUST00000209586 232 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm25589-201ENSMUST00000082502 166 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Snord35b-201ENSMUST00000082833 87 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.8□□□□□ -1.8
Clp1Q99LI9 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Clp1Q99LI9 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Clp1Q99LI9 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Clp1Q99LI9 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm24119-201ENSMUST00000103979 246 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm23990-201ENSMUST00000117031 117 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm12025-201ENSMUST00000117768 144 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm13314-201ENSMUST00000118742 335 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm14069-201ENSMUST00000120815 229 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm25059-201ENSMUST00000157367 117 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm25425-201ENSMUST00000157611 96 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm27582-201ENSMUST00000184084 126 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm43563-201ENSMUST00000196761 198 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Snord80-202ENSMUST00000199023 77 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm25813-201ENSMUST00000082748 191 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm24950-201ENSMUST00000082768 191 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm22421-201ENSMUST00000083058 107 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm23971-201ENSMUST00000083317 191 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm23849-201ENSMUST00000083833 191 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm26316-201ENSMUST00000083886 191 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Clp1Q99LI9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Clp1Q99LI9 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Clp1Q99LI9 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Clp1Q99LI9 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Clp1Q99LI9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.79□□□□□ -1.8
Clp1Q99LI9 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Clp1Q99LI9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
Clp1Q99LI9 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Clp1Q99LI9 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.78□□□□□ -1.8
Clp1Q99LI9 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Clp1Q99LI9 Gm24283-201ENSMUST00000104233 107 ntBASIC3.78□□□□□ -1.8
Clp1Q99LI9 Gm5762-201ENSMUST00000119204 258 ntBASIC3.78□□□□□ -1.8
Clp1Q99LI9 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.78□□□□□ -1.8
Clp1Q99LI9 Gm11786-201ENSMUST00000120799 155 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms