Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm24430-201ENSMUST00000104077 104 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm15010-201ENSMUST00000117153 407 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm7916-201ENSMUST00000120325 456 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm14775-201ENSMUST00000122089 310 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm15214-201ENSMUST00000122155 470 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm23317-201ENSMUST00000157999 129 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm26038-201ENSMUST00000158151 106 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm22164-201ENSMUST00000158413 106 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm7925-201ENSMUST00000166690 401 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm25069-201ENSMUST00000175238 86 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Mir6381-201ENSMUST00000183426 87 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.05□□□□□ -2.24
Lsm1Q8VC85 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Lsm1Q8VC85 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Lsm1Q8VC85 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Gm15443-201ENSMUST00000118947 820 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Gm22236-201ENSMUST00000157093 106 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Gm23083-201ENSMUST00000157851 116 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Gm25162-201ENSMUST00000158906 159 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Gm24020-201ENSMUST00000180156 108 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Snora41-201ENSMUST00000082668 132 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Snora34-201ENSMUST00000083402 138 ntBASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Lsm1Q8VC85 Mir544-201ENSMUST00000103813 78 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm22817-201ENSMUST00000157448 356 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm26271-201ENSMUST00000158349 104 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm26405-201ENSMUST00000158495 100 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm26029-201ENSMUST00000158659 132 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm24366-201ENSMUST00000175383 86 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Mir3098-201ENSMUST00000175416 87 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm43035-201ENSMUST00000197626 517 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm44870-201ENSMUST00000207291 357 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Lsm1Q8VC85 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm25683-201ENSMUST00000083940 131 ntBASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Lsm1Q8VC85 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm22221-201ENSMUST00000157362 103 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Rnu7-201ENSMUST00000158458 62 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm43739-201ENSMUST00000198294 307 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm23370-201ENSMUST00000199545 130 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm44910-201ENSMUST00000208451 396 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm44954-201ENSMUST00000208513 227 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm45456-201ENSMUST00000210841 243 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.02□□□□□ -2.25
Lsm1Q8VC85 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm25038-201ENSMUST00000082928 130 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Mir350-201ENSMUST00000083639 99 ntBASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Lsm1Q8VC85 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Gm3111-201ENSMUST00000167426 490 ntBASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Gm25956-201ENSMUST00000175115 217 ntBASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Gm28409-201ENSMUST00000187064 103 ntBASIC1.01□□□□□ -2.25
Lsm1Q8VC85 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Gm38274-201ENSMUST00000195689 148 ntBASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Gm43245-201ENSMUST00000197603 468 ntBASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.01□□□□□ -2.25
Lsm1Q8VC85 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Snord118-201ENSMUST00000082965 135 ntBASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Gm24252-201ENSMUST00000083700 132 ntBASIC1.01□□□□□ -2.25
Lsm1Q8VC85 Gm14914-201ENSMUST00000117576 2031 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm25269-201ENSMUST00000122601 104 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm23120-201ENSMUST00000157654 287 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm22425-201ENSMUST00000158532 138 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Spanxn4-201ENSMUST00000172433 424 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm20689-201ENSMUST00000176033 279 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm17771-201ENSMUST00000194477 1147 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm45268-201ENSMUST00000210046 370 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 AC157654.1-201ENSMUST00000224130 820 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Lsm1Q8VC85 Mir22-201ENSMUST00000083595 95 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm22577-201ENSMUST00000083731 109 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm13231-201ENSMUST00000119218 2850 ntBASIC1□□□□□ -2.25
Lsm1Q8VC85 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.99□□□□□ -2.25
Lsm1Q8VC85 Gm22780-201ENSMUST00000104084 132 ntBASIC0.99□□□□□ -2.25
Lsm1Q8VC85 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Lsm1Q8VC85 Gm24306-201ENSMUST00000180229 79 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms