Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gm27926-201ENSMUST00000157180 66 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gm25391-201ENSMUST00000157342 134 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gm23892-201ENSMUST00000158105 130 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gm29352-201ENSMUST00000188054 544 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gm34073-201ENSMUST00000195736 212 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gm45791-201ENSMUST00000212908 352 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gm25812-201ENSMUST00000082751 103 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gm26458-201ENSMUST00000082832 128 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gm22704-201ENSMUST00000083027 137 ntBASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Ccdc9Q8VC31 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm24867-201ENSMUST00000104161 107 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm23841-201ENSMUST00000116951 114 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm23759-201ENSMUST00000158351 268 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm17119-201ENSMUST00000163943 280 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm17183-201ENSMUST00000171170 493 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm25235-201ENSMUST00000179933 107 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Mir6993-201ENSMUST00000184912 65 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm27624-201ENSMUST00000185047 177 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm42665-201ENSMUST00000202100 586 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm44977-201ENSMUST00000205283 420 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm18213-201ENSMUST00000207850 178 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 AC152979.2-201ENSMUST00000219702 3814 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm23932-201ENSMUST00000082914 107 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm25755-201ENSMUST00000083396 107 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.18□□□□□ -1.9
Ccdc9Q8VC31 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm12513-201ENSMUST00000118617 352 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm12640-201ENSMUST00000120097 310 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm26149-201ENSMUST00000157432 108 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm22598-201ENSMUST00000157600 127 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm25490-201ENSMUST00000158734 130 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm16326-201ENSMUST00000162843 414 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm37692-201ENSMUST00000192633 232 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm20144-201ENSMUST00000203031 165 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm46993-201ENSMUST00000220708 259 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm22828-201ENSMUST00000083768 107 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Gm650-201ENSMUST00000144428 1551 ntBASIC3.17□□□□□ -1.9
Ccdc9Q8VC31 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm22145-201ENSMUST00000157396 148 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm24082-201ENSMUST00000175175 83 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm26501-201ENSMUST00000178307 107 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm24168-201ENSMUST00000178825 107 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm27851-201ENSMUST00000183529 63 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Mir7k-201ENSMUST00000184115 110 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm43217-201ENSMUST00000199513 367 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm18453-201ENSMUST00000208000 626 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm45296-201ENSMUST00000209625 205 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.16□□□□□ -1.9
Ccdc9Q8VC31 Gm3081-201ENSMUST00000193413 3025 ntBASIC3.15□□□□□ -1.9
Ccdc9Q8VC31 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ccdc9Q8VC31 Gm11490-201ENSMUST00000118128 272 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm13903-201ENSMUST00000120945 193 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm15223-201ENSMUST00000120989 826 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm24630-201ENSMUST00000122768 106 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm26279-201ENSMUST00000157095 102 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm23642-201ENSMUST00000157858 258 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm22389-201ENSMUST00000158193 301 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm24552-201ENSMUST00000158646 103 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm23209-201ENSMUST00000158667 110 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Trbv6-201ENSMUST00000193743 276 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm25203-202ENSMUST00000200458 216 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm44594-201ENSMUST00000208982 407 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm26446-201ENSMUST00000082455 103 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm25796-201ENSMUST00000082645 163 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 Gm25203-201ENSMUST00000082842 215 ntBASIC3.15□□□□□ -1.91
Ccdc9Q8VC31 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.14□□□□□ -1.91
Ccdc9Q8VC31 Gm25538-201ENSMUST00000101943 107 ntBASIC3.14□□□□□ -1.91
Ccdc9Q8VC31 Mir541-201ENSMUST00000102097 90 ntBASIC3.14□□□□□ -1.91
Ccdc9Q8VC31 Gm25407-201ENSMUST00000104102 134 ntBASIC3.14□□□□□ -1.91
Ccdc9Q8VC31 Gm25875-201ENSMUST00000104323 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms