Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.41□□□□□ -2.18
Chrna3Q8R4G9 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.41□□□□□ -2.18
Chrna3Q8R4G9 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.41□□□□□ -2.18
Chrna3Q8R4G9 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Chrna3Q8R4G9 Gm25636-201ENSMUST00000082666 133 ntBASIC1.41□□□□□ -2.18
Chrna3Q8R4G9 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Chrna3Q8R4G9 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.41□□□□□ -2.18
Chrna3Q8R4G9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
Chrna3Q8R4G9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm12639-201ENSMUST00000121400 493 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm23000-201ENSMUST00000157083 139 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm24677-201ENSMUST00000158755 150 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Mir3057-201ENSMUST00000175040 91 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm18417-201ENSMUST00000176564 648 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm28794-201ENSMUST00000185276 136 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm19123-201ENSMUST00000190716 651 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm45375-201ENSMUST00000210338 280 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm16976-205ENSMUST00000227324 226 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Gm23453-201ENSMUST00000083326 106 ntBASIC1.4□□□□□ -2.19
Chrna3Q8R4G9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm13672-201ENSMUST00000117554 459 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm12806-201ENSMUST00000119384 268 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm14972-201ENSMUST00000121780 364 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm25269-201ENSMUST00000122601 104 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm3111-201ENSMUST00000167426 490 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm23090-201ENSMUST00000177331 78 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm17906-201ENSMUST00000202480 901 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm40810-201ENSMUST00000219149 253 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.39□□□□□ -2.19
Chrna3Q8R4G9 Gm11359-201ENSMUST00000120039 567 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm11606-201ENSMUST00000120706 617 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm23170-201ENSMUST00000157158 106 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm24348-201ENSMUST00000158710 130 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm20438-201ENSMUST00000174441 329 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm29397-201ENSMUST00000185205 333 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm37599-201ENSMUST00000193067 489 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm42570-201ENSMUST00000195937 292 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm44923-201ENSMUST00000206673 85 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm45907-201ENSMUST00000213023 193 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm24268-201ENSMUST00000082990 110 ntBASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.38□□□□□ -2.19
Chrna3Q8R4G9 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Gm13059-201ENSMUST00000119881 398 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Snord13-201ENSMUST00000157627 104 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Gm25384-201ENSMUST00000157807 105 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Gm17113-201ENSMUST00000170118 171 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Gm23725-201ENSMUST00000177876 107 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Mir6419-201ENSMUST00000184784 113 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Gm44654-201ENSMUST00000208052 329 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Mir463-201ENSMUST00000093570 75 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Chrna3Q8R4G9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Mir582-201ENSMUST00000103758 81 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Gm24418-201ENSMUST00000177597 79 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Gm24639-201ENSMUST00000178518 79 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Gm22862-201ENSMUST00000178593 121 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Gm23076-201ENSMUST00000179082 79 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Gm25077-201ENSMUST00000179157 79 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Gm44135-201ENSMUST00000205221 368 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Gm24977-201ENSMUST00000083106 163 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Snord38a-201ENSMUST00000083746 71 ntBASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Chrna3Q8R4G9 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms