Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ushbp1Q8R370 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ushbp1Q8R370 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.34□□□□□ -1.87
Ushbp1Q8R370 Mir693-201ENSMUST00000102187 89 ntBASIC3.34□□□□□ -1.87
Ushbp1Q8R370 Gm11572-201ENSMUST00000119164 120 ntBASIC3.34□□□□□ -1.87
Ushbp1Q8R370 Gm20651-201ENSMUST00000177219 329 ntBASIC3.34□□□□□ -1.87
Ushbp1Q8R370 Gm29140-201ENSMUST00000190187 476 ntBASIC3.34□□□□□ -1.87
Ushbp1Q8R370 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.34□□□□□ -1.87
Ushbp1Q8R370 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.34□□□□□ -1.87
Ushbp1Q8R370 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.34□□□□□ -1.87
Ushbp1Q8R370 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.34□□□□□ -1.87
Ushbp1Q8R370 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.34□□□□□ -1.87
Ushbp1Q8R370 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ushbp1Q8R370 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.34□□□□□ -1.88
Ushbp1Q8R370 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm25875-201ENSMUST00000104323 107 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm14069-201ENSMUST00000120815 229 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm24681-201ENSMUST00000158760 107 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm23355-201ENSMUST00000177614 107 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm23148-201ENSMUST00000180367 107 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm44977-201ENSMUST00000205283 420 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm7065-201ENSMUST00000222150 474 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm25078-201ENSMUST00000082530 107 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm25258-201ENSMUST00000083049 107 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm26314-201ENSMUST00000083891 107 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ushbp1Q8R370 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.33□□□□□ -1.88
Ushbp1Q8R370 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm14894-201ENSMUST00000117170 270 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm9009-201ENSMUST00000117321 326 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm12686-201ENSMUST00000120546 397 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm13581-201ENSMUST00000120675 278 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm13210-201ENSMUST00000121483 273 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm15065-201ENSMUST00000121699 273 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm24716-201ENSMUST00000157524 104 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm17100-201ENSMUST00000168963 272 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm25939-201ENSMUST00000179876 191 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm27470-201ENSMUST00000184070 210 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm27582-201ENSMUST00000184084 126 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm37449-201ENSMUST00000193016 270 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm18658-201ENSMUST00000195558 270 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Mir3535-201ENSMUST00000197651 147 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.32□□□□□ -1.88
Ushbp1Q8R370 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm26225-201ENSMUST00000082508 135 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm22443-201ENSMUST00000082890 107 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm26327-201ENSMUST00000093724 111 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ushbp1Q8R370 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm24640-201ENSMUST00000116949 126 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm22626-201ENSMUST00000116990 126 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm15183-201ENSMUST00000118933 348 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm12155-201ENSMUST00000121267 160 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm26099-201ENSMUST00000157248 109 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm22447-201ENSMUST00000158155 92 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm24056-201ENSMUST00000158617 146 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm23864-201ENSMUST00000177607 107 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Mir5123-201ENSMUST00000177794 83 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm24761-201ENSMUST00000179589 127 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm24488-201ENSMUST00000179934 127 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm25701-201ENSMUST00000179988 127 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm26431-201ENSMUST00000180199 127 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Mir6370-201ENSMUST00000183510 120 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Mir6336-201ENSMUST00000183581 130 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm9377-201ENSMUST00000207227 623 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Gm45879-201ENSMUST00000212521 392 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.31□□□□□ -1.88
Ushbp1Q8R370 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Snord7-201ENSMUST00000083781 97 ntBASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ushbp1Q8R370 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ushbp1Q8R370 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ushbp1Q8R370 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Gm23760-201ENSMUST00000158350 116 ntBASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Gm21893-201ENSMUST00000179119 397 ntBASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Gm20058-201ENSMUST00000186939 284 ntBASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Gm37763-201ENSMUST00000193445 120 ntBASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Gm42739-201ENSMUST00000200687 226 ntBASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Gm40810-201ENSMUST00000219149 253 ntBASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Gm25896-201ENSMUST00000083713 136 ntBASIC3.3□□□□□ -1.88
Ushbp1Q8R370 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms