Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm23144-201ENSMUST00000180226 107 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm43680-201ENSMUST00000199466 340 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Mir463-201ENSMUST00000093570 75 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.06□□□□□ -2.24
Ccdc28aQ8CEI3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm23422-201ENSMUST00000102000 107 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm26080-201ENSMUST00000104069 131 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm7916-201ENSMUST00000120325 456 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm13409-201ENSMUST00000122072 546 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm8121-201ENSMUST00000153583 499 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm24915-201ENSMUST00000157288 78 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm24851-201ENSMUST00000158028 103 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm22733-201ENSMUST00000158094 91 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm16399-201ENSMUST00000181423 219 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Mir6380-201ENSMUST00000184334 81 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm9402-201ENSMUST00000196849 388 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm43199-201ENSMUST00000200019 307 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Gm17990-201ENSMUST00000211728 553 ntBASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Ccdc28aQ8CEI3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm24889-201ENSMUST00000104388 132 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm14638-201ENSMUST00000121338 216 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm14366-201ENSMUST00000121970 730 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm25423-201ENSMUST00000157609 107 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm20689-201ENSMUST00000176033 279 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm18417-201ENSMUST00000176564 648 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm37727-201ENSMUST00000191637 819 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm37709-201ENSMUST00000195074 600 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm18971-201ENSMUST00000197240 374 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm44011-201ENSMUST00000203336 394 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.04□□□□□ -2.24
Ccdc28aQ8CEI3 Mir582-201ENSMUST00000103758 81 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm12779-201ENSMUST00000121496 143 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm15365-201ENSMUST00000122392 300 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm25392-201ENSMUST00000157335 297 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm23352-201ENSMUST00000158428 64 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm23025-201ENSMUST00000158769 111 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Mir3098-201ENSMUST00000175416 87 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm22129-201ENSMUST00000179034 107 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm44910-201ENSMUST00000208451 396 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm10092-201ENSMUST00000077110 180 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm22572-201ENSMUST00000082985 105 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm24268-201ENSMUST00000082990 110 ntBASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.03□□□□□ -2.24
Ccdc28aQ8CEI3 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm22780-201ENSMUST00000104084 132 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm14624-201ENSMUST00000117746 192 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm15266-201ENSMUST00000119635 255 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm24892-201ENSMUST00000122747 104 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm23000-201ENSMUST00000157083 139 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm23124-201ENSMUST00000157650 107 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm27490-201ENSMUST00000184754 128 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm44870-201ENSMUST00000207291 357 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm45366-201ENSMUST00000209828 384 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm24252-201ENSMUST00000083700 132 ntBASIC1.02□□□□□ -2.25
Ccdc28aQ8CEI3 Gm24632-201ENSMUST00000122770 323 ntBASIC1.01□□□□□ -2.25
Ccdc28aQ8CEI3 Gm24076-201ENSMUST00000158179 94 ntBASIC1.01□□□□□ -2.25
Ccdc28aQ8CEI3 Gm26213-201ENSMUST00000158582 110 ntBASIC1.01□□□□□ -2.25
Ccdc28aQ8CEI3 Gm25162-201ENSMUST00000158906 159 ntBASIC1.01□□□□□ -2.25
Ccdc28aQ8CEI3 Gm23090-201ENSMUST00000177331 78 ntBASIC1.01□□□□□ -2.25
Ccdc28aQ8CEI3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Ccdc28aQ8CEI3 Mir7675-201ENSMUST00000184262 58 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms