Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm37771-201ENSMUST00000193121 265 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm35262-201ENSMUST00000215133 267 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm24598-201ENSMUST00000122510 74 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm22075-201ENSMUST00000158599 192 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm23144-201ENSMUST00000180226 107 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Snord49b-201ENSMUST00000082503 72 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm14594-201ENSMUST00000118052 537 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm13087-201ENSMUST00000118298 256 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm14590-201ENSMUST00000118934 537 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm24385-201ENSMUST00000122694 350 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm22164-201ENSMUST00000158413 106 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm24221-201ENSMUST00000158833 313 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm23339-201ENSMUST00000158962 139 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm14596-201ENSMUST00000180268 537 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm14595-201ENSMUST00000180335 537 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm29011-201ENSMUST00000191059 712 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm44326-201ENSMUST00000198226 101 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm44524-201ENSMUST00000203899 271 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm25851-201ENSMUST00000082794 107 ntBASIC0.3□□□□□ -2.36
Col6a6Q8C6K9 Gm24079-201ENSMUST00000104352 132 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm12370-201ENSMUST00000117809 604 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm16186-201ENSMUST00000120132 216 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm24903-201ENSMUST00000158131 126 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Mir5104-201ENSMUST00000175319 94 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Mir28b-201ENSMUST00000175399 80 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm18397-201ENSMUST00000176704 587 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm26265-201ENSMUST00000083277 135 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm25126-201ENSMUST00000083343 102 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm42721-201ENSMUST00000197165 1523 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm12889-201ENSMUST00000118684 241 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm23277-201ENSMUST00000157914 136 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm24573-201ENSMUST00000175499 112 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm28000-201ENSMUST00000184380 85 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm38231-201ENSMUST00000192030 347 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm10264-201ENSMUST00000220589 429 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.29□□□□□ -2.36
Col6a6Q8C6K9 Gm22489-201ENSMUST00000116813 62 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm12053-201ENSMUST00000119022 252 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm22337-201ENSMUST00000157721 132 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm24808-201ENSMUST00000157993 118 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm27420-201ENSMUST00000183823 79 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm37568-201ENSMUST00000191755 364 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm44041-201ENSMUST00000203678 396 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm10092-201ENSMUST00000077110 180 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Snord1a-201ENSMUST00000083160 74 ntBASIC0.28□□□□□ -2.36
Col6a6Q8C6K9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
Col6a6Q8C6K9 Gm24582-201ENSMUST00000103967 103 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm11065-201ENSMUST00000111462 228 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm14554-201ENSMUST00000119548 661 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 AA413626-201ENSMUST00000121125 494 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm15214-201ENSMUST00000122155 470 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm24747-201ENSMUST00000157835 87 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm25772-201ENSMUST00000158574 56 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm25596-201ENSMUST00000178368 107 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm44976-201ENSMUST00000205543 261 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm24018-201ENSMUST00000083232 107 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm14972-201ENSMUST00000121780 364 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm22452-201ENSMUST00000122804 104 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm26484-201ENSMUST00000158018 106 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm23419-201ENSMUST00000175523 84 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm6660-201ENSMUST00000179149 468 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm18357-201ENSMUST00000188184 580 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm29600-201ENSMUST00000188687 377 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm44825-201ENSMUST00000207557 150 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm44598-201ENSMUST00000207566 150 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.27□□□□□ -2.37
Col6a6Q8C6K9 Gm23102-201ENSMUST00000083724 116 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms