Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm26228-201ENSMUST00000082512 107 ntBASIC1.05□□□□□ -2.24
Trub1Q8C0D0 Gm25080-201ENSMUST00000082526 107 ntBASIC1.05□□□□□ -2.24
Trub1Q8C0D0 Gm23245-201ENSMUST00000083370 135 ntBASIC1.05□□□□□ -2.24
Trub1Q8C0D0 Gm22578-201ENSMUST00000083730 107 ntBASIC1.05□□□□□ -2.24
Trub1Q8C0D0 Gm25518-201ENSMUST00000083864 107 ntBASIC1.05□□□□□ -2.24
Trub1Q8C0D0 Gm22831-201ENSMUST00000102473 109 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm14366-201ENSMUST00000121970 730 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm24777-201ENSMUST00000157644 107 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm22099-201ENSMUST00000157925 123 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm23339-201ENSMUST00000158962 139 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm20689-201ENSMUST00000176033 279 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Mir7665-201ENSMUST00000184907 63 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm45907-201ENSMUST00000213023 193 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm25589-201ENSMUST00000082502 166 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm23453-201ENSMUST00000083326 106 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm25007-201ENSMUST00000083808 133 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Trub1Q8C0D0 Gm25068-201ENSMUST00000103895 110 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Gm24910-201ENSMUST00000157289 272 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Gm23589-201ENSMUST00000157660 105 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Traj60-201ENSMUST00000167781 54 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Gm20613-201ENSMUST00000175828 345 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Mir6355-201ENSMUST00000183687 106 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Mir6419-201ENSMUST00000184784 113 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Gm28474-201ENSMUST00000188501 315 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Gm26493-201ENSMUST00000083155 136 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.03□□□□□ -2.24
Trub1Q8C0D0 Gm14638-201ENSMUST00000121338 216 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm12639-201ENSMUST00000121400 493 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm12779-201ENSMUST00000121496 143 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Mir1967-201ENSMUST00000157789 82 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm22537-201ENSMUST00000158172 199 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Zfp950-206ENSMUST00000178819 171 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm27326-201ENSMUST00000183504 95 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trub1Q8C0D0 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm37599-201ENSMUST00000193067 489 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm18546-201ENSMUST00000197245 676 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Mir6962-201ENSMUST00000199512 63 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm43914-201ENSMUST00000203592 594 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm44870-201ENSMUST00000207291 357 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Gm44655-201ENSMUST00000207768 423 ntBASIC1.02□□□□□ -2.25
Trub1Q8C0D0 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm23422-201ENSMUST00000102000 107 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm13672-201ENSMUST00000117554 459 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm23000-201ENSMUST00000157083 139 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm23170-201ENSMUST00000157158 106 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm24851-201ENSMUST00000158028 103 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm24229-201ENSMUST00000158830 118 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm7925-201ENSMUST00000166690 401 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm20438-201ENSMUST00000174441 329 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm23267-201ENSMUST00000178490 132 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm24862-201ENSMUST00000179103 79 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm23310-201ENSMUST00000179105 79 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm25461-201ENSMUST00000179293 79 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Mir6380-201ENSMUST00000184334 81 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm9402-201ENSMUST00000196849 388 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm44654-201ENSMUST00000208052 329 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.01□□□□□ -2.25
Trub1Q8C0D0 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Mir340-201ENSMUST00000083483 98 ntBASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trub1Q8C0D0 Gm22591-201ENSMUST00000104243 106 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Gm14793-201ENSMUST00000118739 311 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Gm12053-201ENSMUST00000119022 252 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Gm12417-201ENSMUST00000119153 403 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Gm24598-201ENSMUST00000122510 74 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Gm25269-201ENSMUST00000122601 104 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Gm23981-201ENSMUST00000157136 106 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Gm24481-201ENSMUST00000157210 102 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Gm22074-201ENSMUST00000158595 113 ntBASIC1□□□□□ -2.25
Trub1Q8C0D0 Gm23269-201ENSMUST00000178701 107 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms