Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Snord80-202ENSMUST00000199023 77 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm43899-201ENSMUST00000203675 246 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm18213-201ENSMUST00000207850 178 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm45543-201ENSMUST00000209327 88 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim56Q80VI1 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim56Q80VI1 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim56Q80VI1 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Gm11460-201ENSMUST00000118200 361 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Gm25920-201ENSMUST00000158307 99 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Gm24056-201ENSMUST00000158617 146 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Mir669k-201ENSMUST00000177742 127 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Gm25673-201ENSMUST00000179957 127 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim56Q80VI1 Gm27893-201ENSMUST00000184408 194 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim56Q80VI1 Gm19620-201ENSMUST00000195972 434 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim56Q80VI1 Mir137-201ENSMUST00000083635 73 ntBASIC3.83□□□□□ -1.8
Trim56Q80VI1 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim56Q80VI1 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim56Q80VI1 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim56Q80VI1 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim56Q80VI1 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim56Q80VI1 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim56Q80VI1 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Trim56Q80VI1 Gm24127-201ENSMUST00000104110 130 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 Gm7123-201ENSMUST00000117647 213 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 Gm15183-201ENSMUST00000118933 348 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 Gm22560-201ENSMUST00000157332 120 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 Mir721-201ENSMUST00000200230 88 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 Gm45013-201ENSMUST00000206883 178 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.82□□□□□ -1.8
Trim56Q80VI1 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim56Q80VI1 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim56Q80VI1 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Trim56Q80VI1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim56Q80VI1 Gm24586-201ENSMUST00000116695 89 ntBASIC3.81□□□□□ -1.8
Trim56Q80VI1 Gm23589-201ENSMUST00000157660 105 ntBASIC3.81□□□□□ -1.8
Trim56Q80VI1 Mir6370-201ENSMUST00000183510 120 ntBASIC3.81□□□□□ -1.8
Trim56Q80VI1 Gm27783-201ENSMUST00000183534 105 ntBASIC3.81□□□□□ -1.8
Trim56Q80VI1 Gm27869-201ENSMUST00000184327 122 ntBASIC3.81□□□□□ -1.8
Trim56Q80VI1 Gm25813-201ENSMUST00000082748 191 ntBASIC3.81□□□□□ -1.8
Trim56Q80VI1 Mir146-201ENSMUST00000083667 65 ntBASIC3.81□□□□□ -1.8
Trim56Q80VI1 Gm10360-201ENSMUST00000097219 272 ntBASIC3.81□□□□□ -1.8
Trim56Q80VI1 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim56Q80VI1 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim56Q80VI1 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim56Q80VI1 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Gm23492-201ENSMUST00000116837 115 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Gm25071-201ENSMUST00000175232 70 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Gm25198-201ENSMUST00000178574 110 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Mir7578-201ENSMUST00000183455 82 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Gm29452-201ENSMUST00000187996 313 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim56Q80VI1 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Gm22979-201ENSMUST00000082609 159 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Gm22304-201ENSMUST00000082688 129 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Gm23136-201ENSMUST00000083425 99 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Gm26327-201ENSMUST00000093724 111 ntBASIC3.8□□□□□ -1.8
Trim56Q80VI1 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Trim56Q80VI1 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Gm24053-201ENSMUST00000158620 105 ntBASIC3.79□□□□□ -1.8
Trim56Q80VI1 Gm26061-201ENSMUST00000175584 108 ntBASIC3.79□□□□□ -1.8
Trim56Q80VI1 Gm28155-201ENSMUST00000191066 151 ntBASIC3.79□□□□□ -1.8
Trim56Q80VI1 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Gm9712-201ENSMUST00000210842 311 ntBASIC3.79□□□□□ -1.8
Trim56Q80VI1 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.79□□□□□ -1.8
Trim56Q80VI1 Gm26454-201ENSMUST00000082682 107 ntBASIC3.79□□□□□ -1.8
Trim56Q80VI1 Gm22443-201ENSMUST00000082890 107 ntBASIC3.79□□□□□ -1.8
Trim56Q80VI1 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim56Q80VI1 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim56Q80VI1 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.78□□□□□ -1.8
Trim56Q80VI1 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim56Q80VI1 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim56Q80VI1 Gm24015-201ENSMUST00000157725 232 ntBASIC3.78□□□□□ -1.8
Trim56Q80VI1 Gm23642-201ENSMUST00000157858 258 ntBASIC3.78□□□□□ -1.8
Trim56Q80VI1 Gm21827-201ENSMUST00000178247 423 ntBASIC3.78□□□□□ -1.8
Trim56Q80VI1 Gm44922-201ENSMUST00000206690 90 ntBASIC3.78□□□□□ -1.8
Trim56Q80VI1 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.78□□□□□ -1.8
Trim56Q80VI1 Gm22299-201ENSMUST00000082663 136 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms