Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm24127-201ENSMUST00000104110 130 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm25105-201ENSMUST00000122477 130 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm26482-201ENSMUST00000158015 62 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm17113-201ENSMUST00000170118 171 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm27271-201ENSMUST00000183509 170 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm6947-201ENSMUST00000186254 78 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm44352-201ENSMUST00000196358 110 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.64□□□□□ -1.83
Sh3rf1Q69ZI1 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Gm25272-201ENSMUST00000104293 128 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Gm23168-201ENSMUST00000157156 143 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Gm23234-201ENSMUST00000157304 134 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Gm29167-201ENSMUST00000190024 377 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Gm28155-201ENSMUST00000191066 151 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Gm37001-201ENSMUST00000193377 190 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Gm22681-201ENSMUST00000083853 106 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Mir488-201ENSMUST00000093595 109 ntBASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Sh3rf1Q69ZI1 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm12143-201ENSMUST00000119666 332 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm14687-201ENSMUST00000120206 363 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm22477-201ENSMUST00000122569 316 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm22075-201ENSMUST00000158599 192 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm22890-201ENSMUST00000158642 144 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm25380-201ENSMUST00000175463 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm24641-201ENSMUST00000178055 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm25484-201ENSMUST00000178217 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm26138-201ENSMUST00000179236 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm22821-201ENSMUST00000179288 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm27520-201ENSMUST00000184872 81 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm38298-201ENSMUST00000193578 118 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm37575-201ENSMUST00000195467 309 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm18982-201ENSMUST00000198118 529 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm23140-201ENSMUST00000082487 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm23298-201ENSMUST00000083181 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm24614-201ENSMUST00000083269 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm22970-201ENSMUST00000083304 186 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm22057-201ENSMUST00000083387 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm22576-201ENSMUST00000083733 104 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm25516-201ENSMUST00000083857 107 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.62□□□□□ -1.83
Sh3rf1Q69ZI1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Gm14626-201ENSMUST00000117619 216 ntBASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Gm25393-201ENSMUST00000157336 285 ntBASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Gm23540-201ENSMUST00000157543 164 ntBASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Gm24086-201ENSMUST00000175171 98 ntBASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Gm27308-201ENSMUST00000184807 233 ntBASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Gm37104-201ENSMUST00000193278 196 ntBASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Gm43680-201ENSMUST00000199466 340 ntBASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Gm5010-201ENSMUST00000213131 260 ntBASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.61□□□□□ -1.83
Sh3rf1Q69ZI1 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Gm12449-201ENSMUST00000117572 234 ntBASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Gm12934-201ENSMUST00000119221 343 ntBASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Gm12897-201ENSMUST00000120341 250 ntBASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Gm25980-201ENSMUST00000157176 218 ntBASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Gm28314-201ENSMUST00000191276 345 ntBASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Gm24355-201ENSMUST00000082858 122 ntBASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf1Q69ZI1 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms