Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm23895-201ENSMUST00000158108 160 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm22384-201ENSMUST00000158187 104 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm23053-201ENSMUST00000175136 96 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm27921-201ENSMUST00000183968 108 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm27245-201ENSMUST00000184385 376 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm7329-201ENSMUST00000185915 210 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.58□□□□□ -1.84
Trim28Q62318 Gm43991-201ENSMUST00000203751 274 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm25078-201ENSMUST00000082530 107 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm25815-201ENSMUST00000082755 107 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim28Q62318 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim28Q62318 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim28Q62318 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trim28Q62318 Gm15846-201ENSMUST00000116022 320 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 Gm12640-201ENSMUST00000120097 310 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.57□□□□□ -1.84
Trim28Q62318 Gm23921-201ENSMUST00000175258 107 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.57□□□□□ -1.84
Trim28Q62318 Gm44844-201ENSMUST00000207242 336 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 Gm6842-201ENSMUST00000211361 390 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 Gm23932-201ENSMUST00000082914 107 ntBASIC3.57□□□□□ -1.84
Trim28Q62318 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Trim28Q62318 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Trim28Q62318 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim28Q62318 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Gm25153-201ENSMUST00000157118 156 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Gm23557-201ENSMUST00000157820 138 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Gm16111-201ENSMUST00000162128 285 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Gm17186-201ENSMUST00000171742 456 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Gm19123-201ENSMUST00000190716 651 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Gm37997-201ENSMUST00000193515 267 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.56□□□□□ -1.84
Trim28Q62318 Gm44966-201ENSMUST00000208096 157 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 AC159896.1-201ENSMUST00000215264 215 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.56□□□□□ -1.84
Trim28Q62318 Mir10a-201ENSMUST00000083585 110 ntBASIC3.56□□□□□ -1.84
Trim28Q62318 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim28Q62318 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim28Q62318 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim28Q62318 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim28Q62318 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim28Q62318 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Trim28Q62318 Mir687-201ENSMUST00000102166 89 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm24890-201ENSMUST00000104389 102 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm24481-201ENSMUST00000157210 102 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm25015-201ENSMUST00000158400 128 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm20718-201ENSMUST00000176058 259 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm23355-201ENSMUST00000177614 107 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim28Q62318 Gm23148-201ENSMUST00000180367 107 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm43402-201ENSMUST00000197159 159 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm36189-201ENSMUST00000204113 523 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm44208-201ENSMUST00000205199 421 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm45315-201ENSMUST00000209283 333 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim28Q62318 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Gm23041-201ENSMUST00000083868 106 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Trim28Q62318 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Trim28Q62318 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.55□□□□□ -1.84
Trim28Q62318 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Trim28Q62318 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Trim28Q62318 Mir701-201ENSMUST00000102208 109 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim28Q62318 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm12191-201ENSMUST00000118307 348 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm9703-201ENSMUST00000119573 343 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.54□□□□□ -1.84
Trim28Q62318 Gm14562-201ENSMUST00000129885 543 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm22098-201ENSMUST00000157930 85 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm22315-201ENSMUST00000158010 143 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm24392-201ENSMUST00000158136 103 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm24667-201ENSMUST00000158938 103 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm23571-201ENSMUST00000180073 127 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Mir7013-201ENSMUST00000183540 72 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Mir6372-201ENSMUST00000185114 109 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm29022-201ENSMUST00000190702 225 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm44324-201ENSMUST00000198517 135 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm30674-201ENSMUST00000214523 392 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim28Q62318 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim28Q62318 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm26457-201ENSMUST00000082678 78 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Gm10343-201ENSMUST00000096279 348 ntBASIC3.54□□□□□ -1.84
Trim28Q62318 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms