Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CtcfQ61164 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CtcfQ61164 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CtcfQ61164 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.88□□□□□ -1.95
CtcfQ61164 Gm15211-201ENSMUST00000118932 528 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm14792-201ENSMUST00000119725 258 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.88□□□□□ -1.95
CtcfQ61164 Gm27926-201ENSMUST00000157180 66 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm24358-201ENSMUST00000158424 288 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm17065-201ENSMUST00000165245 239 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm23933-201ENSMUST00000178405 79 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Mir6355-201ENSMUST00000183687 106 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Mir6346-201ENSMUST00000183982 81 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm42925-201ENSMUST00000197359 285 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.88□□□□□ -1.95
CtcfQ61164 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm22571-201ENSMUST00000082984 70 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm23249-201ENSMUST00000083369 161 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm26166-201ENSMUST00000083788 107 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Gm23845-201ENSMUST00000083834 152 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CtcfQ61164 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.88□□□□□ -1.95
CtcfQ61164 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CtcfQ61164 Gm23142-201ENSMUST00000101848 105 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm26240-201ENSMUST00000101893 105 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm24126-201ENSMUST00000104111 106 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CtcfQ61164 Gm27510-201ENSMUST00000158214 64 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm26215-201ENSMUST00000158584 139 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm22114-201ENSMUST00000177756 107 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm25528-201ENSMUST00000180264 132 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm23190-201ENSMUST00000180307 64 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm27521-201ENSMUST00000184022 64 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Mir195b-201ENSMUST00000184814 97 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.87□□□□□ -1.95
CtcfQ61164 Gm29147-201ENSMUST00000186846 315 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm29227-201ENSMUST00000187139 315 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm29034-201ENSMUST00000188099 315 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm28160-201ENSMUST00000191229 315 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.87□□□□□ -1.95
CtcfQ61164 Gm37129-201ENSMUST00000195791 315 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm44524-201ENSMUST00000203899 271 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm45150-201ENSMUST00000206051 467 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm8940-201ENSMUST00000212585 219 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.87□□□□□ -1.95
CtcfQ61164 Gm25199-201ENSMUST00000083095 104 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Mir10a-201ENSMUST00000083585 110 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Gm23847-201ENSMUST00000083829 110 ntBASIC2.87□□□□□ -1.95
CtcfQ61164 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CtcfQ61164 Gm25485-201ENSMUST00000104120 132 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm24338-201ENSMUST00000104205 127 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm11065-201ENSMUST00000111462 228 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm12647-201ENSMUST00000118977 265 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm12956-201ENSMUST00000122184 414 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.86□□□□□ -1.95
CtcfQ61164 Gm23557-201ENSMUST00000157820 138 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Snora15-201ENSMUST00000177461 131 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm28288-201ENSMUST00000191019 214 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.86□□□□□ -1.95
CtcfQ61164 Gm23370-202ENSMUST00000197008 129 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm44881-201ENSMUST00000205425 367 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm45678-201ENSMUST00000210509 295 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
CtcfQ61164 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Gm26458-201ENSMUST00000082832 128 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Snord7-201ENSMUST00000083781 97 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CtcfQ61164 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.86□□□□□ -1.95
CtcfQ61164 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CtcfQ61164 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CtcfQ61164 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CtcfQ61164 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CtcfQ61164 Mir701-201ENSMUST00000102208 109 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CtcfQ61164 Gm22674-201ENSMUST00000104413 131 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm24683-201ENSMUST00000104840 88 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm15526-201ENSMUST00000112504 204 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CtcfQ61164 Gm13457-201ENSMUST00000117885 267 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm12513-201ENSMUST00000118617 352 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm22328-201ENSMUST00000158074 112 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm23258-201ENSMUST00000158319 106 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm22666-201ENSMUST00000158717 164 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm25956-201ENSMUST00000175115 217 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm42570-201ENSMUST00000195937 292 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm43193-201ENSMUST00000197732 441 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm43600-201ENSMUST00000202134 223 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.85□□□□□ -1.95
CtcfQ61164 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.85□□□□□ -1.95
CtcfQ61164 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
CtcfQ61164 Gm46997-201ENSMUST00000222108 217 ntBASIC2.85□□□□□ -1.95
CtcfQ61164 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms