Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Gm26000-201ENSMUST00000157991 107 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Gm16546-201ENSMUST00000159442 355 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Gm27420-201ENSMUST00000183823 79 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Gm9236-201ENSMUST00000196892 587 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Mir219b-201ENSMUST00000198317 65 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Gm44465-201ENSMUST00000199536 114 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23628-201ENSMUST00000082464 173 ntBASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.34□□□□□ -2.36
Trav6d-4Q5R1I0 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23691-201ENSMUST00000101878 107 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23203-201ENSMUST00000104374 107 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm25496-201ENSMUST00000104430 120 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm14884-201ENSMUST00000120456 196 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm12045-201ENSMUST00000122122 573 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm17377-201ENSMUST00000165184 207 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm26968-201ENSMUST00000182894 481 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm43432-201ENSMUST00000196352 121 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 AC152979.4-201ENSMUST00000219893 379 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm25851-201ENSMUST00000082794 107 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Snord32a-201ENSMUST00000083285 83 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.33□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23126-201ENSMUST00000104260 134 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Gm24598-201ENSMUST00000122510 74 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Mir1942-201ENSMUST00000157274 63 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23854-201ENSMUST00000158378 108 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Gm29492-201ENSMUST00000187124 457 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Gm36966-201ENSMUST00000192217 413 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Gm42925-201ENSMUST00000197359 285 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Gm44828-201ENSMUST00000203745 106 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Gm44961-201ENSMUST00000207450 196 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23517-201ENSMUST00000082830 192 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.32□□□□□ -2.36
Trav6d-4Q5R1I0 Gm12825-201ENSMUST00000120249 563 ntBASIC0.31□□□□□ -2.36
Trav6d-4Q5R1I0 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.31□□□□□ -2.36
Trav6d-4Q5R1I0 Gm6272-201ENSMUST00000121256 171 ntBASIC0.31□□□□□ -2.36
Trav6d-4Q5R1I0 Mir6335-201ENSMUST00000184081 98 ntBASIC0.31□□□□□ -2.36
Trav6d-4Q5R1I0 Gm44052-201ENSMUST00000203382 396 ntBASIC0.31□□□□□ -2.36
Trav6d-4Q5R1I0 Gm44655-201ENSMUST00000207768 423 ntBASIC0.31□□□□□ -2.36
Trav6d-4Q5R1I0 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Trav6d-4Q5R1I0 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.31□□□□□ -2.36
Trav6d-4Q5R1I0 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.31□□□□□ -2.36
Trav6d-4Q5R1I0 Gm22759-201ENSMUST00000102276 96 ntBASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Gm14358-201ENSMUST00000118458 403 ntBASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Gm22431-201ENSMUST00000158545 107 ntBASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Gm20415-201ENSMUST00000172877 423 ntBASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Gm21726-201ENSMUST00000179654 392 ntBASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Gm36956-201ENSMUST00000193830 214 ntBASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Gm44326-201ENSMUST00000198226 101 ntBASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Gm9795-201ENSMUST00000062156 693 ntBASIC0.3□□□□□ -2.36
Trav6d-4Q5R1I0 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm14761-201ENSMUST00000121363 262 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23956-201ENSMUST00000157211 119 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm22522-201ENSMUST00000158271 151 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm20874-201ENSMUST00000178356 663 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm37599-201ENSMUST00000193067 489 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm37693-201ENSMUST00000194562 234 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm20102-201ENSMUST00000222445 220 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23042-201ENSMUST00000083866 101 ntBASIC0.29□□□□□ -2.36
Trav6d-4Q5R1I0 Gm24271-201ENSMUST00000102327 111 ntBASIC0.28□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23060-201ENSMUST00000102345 109 ntBASIC0.28□□□□□ -2.36
Trav6d-4Q5R1I0 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC0.28□□□□□ -2.36
Trav6d-4Q5R1I0 Gm19709-201ENSMUST00000215403 482 ntBASIC0.28□□□□□ -2.36
Trav6d-4Q5R1I0 Gm46103-201ENSMUST00000217614 341 ntBASIC0.28□□□□□ -2.36
Trav6d-4Q5R1I0 AC154552.5-201ENSMUST00000222352 207 ntBASIC0.28□□□□□ -2.36
Trav6d-4Q5R1I0 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.28□□□□□ -2.36
Trav6d-4Q5R1I0 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.28□□□□□ -2.36
Trav6d-4Q5R1I0 Gm23454-201ENSMUST00000083332 133 ntBASIC0.28□□□□□ -2.36
Trav6d-4Q5R1I0 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
Trav6d-4Q5R1I0 Gm23206-201ENSMUST00000122720 184 ntBASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Gm26150-201ENSMUST00000157426 151 ntBASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Gm23120-201ENSMUST00000157654 287 ntBASIC0.27□□□□□ -2.37
Trav6d-4Q5R1I0 Gm23858-201ENSMUST00000158384 106 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms