Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm22718-201ENSMUST00000122701 315 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm24478-201ENSMUST00000157439 158 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm24851-201ENSMUST00000158028 103 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm22328-201ENSMUST00000158074 112 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm24551-201ENSMUST00000158645 92 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Mir6388-201ENSMUST00000184417 75 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Mir195b-201ENSMUST00000184814 97 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm43245-201ENSMUST00000197603 468 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Mir1291-201ENSMUST00000199842 117 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm44655-201ENSMUST00000207768 423 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Gm23448-201ENSMUST00000083151 104 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Snora34-201ENSMUST00000083402 138 ntBASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Trav3-3Q5R1C3 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm25421-201ENSMUST00000104218 164 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm15861-201ENSMUST00000120979 339 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm24895-201ENSMUST00000122742 74 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm26278-201ENSMUST00000157098 132 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm23391-201ENSMUST00000157579 104 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Snord13-201ENSMUST00000157627 104 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm24780-201ENSMUST00000157635 143 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm22654-201ENSMUST00000157874 105 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm22666-201ENSMUST00000158717 164 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm21815-201ENSMUST00000178213 664 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm20874-201ENSMUST00000178356 663 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm22166-201ENSMUST00000178419 121 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm23288-201ENSMUST00000179213 121 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm23860-201ENSMUST00000179446 132 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm29352-201ENSMUST00000188054 544 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm45116-201ENSMUST00000207392 275 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Trav3-3Q5R1C3 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.21
Trav3-3Q5R1C3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Mir1193-201ENSMUST00000116761 121 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm11359-201ENSMUST00000120039 567 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm14972-201ENSMUST00000121780 364 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm26149-201ENSMUST00000157432 108 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm23120-201ENSMUST00000157654 287 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm21754-201ENSMUST00000177550 479 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm9830-201ENSMUST00000178509 357 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm18296-201ENSMUST00000192475 783 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm37533-201ENSMUST00000193848 545 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm44337-201ENSMUST00000196553 114 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm44830-201ENSMUST00000207667 584 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm45344-201ENSMUST00000211610 341 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Gm25586-201ENSMUST00000082499 112 ntBASIC1.21□□□□□ -2.22
Trav3-3Q5R1C3 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm23551-201ENSMUST00000116852 121 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm25054-201ENSMUST00000157370 97 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm24358-201ENSMUST00000158424 288 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm24348-201ENSMUST00000158710 130 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm24229-201ENSMUST00000158830 118 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Mir3092-201ENSMUST00000174954 96 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm22862-201ENSMUST00000178593 121 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm23523-201ENSMUST00000180190 107 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.2□□□□□ -2.22
Trav3-3Q5R1C3 Gm27385-201ENSMUST00000184747 104 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms