Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm23136-201ENSMUST00000083425 99 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm26314-201ENSMUST00000083891 107 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Rnf180Q3U827 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Rnf180Q3U827 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Rnf180Q3U827 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
Rnf180Q3U827 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Snora36b-201ENSMUST00000104383 132 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.55□□□□□ -1.84
Rnf180Q3U827 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.55□□□□□ -1.84
Rnf180Q3U827 Mir8096-201ENSMUST00000184526 127 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Mir7017-201ENSMUST00000184894 62 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Gm23370-202ENSMUST00000197008 129 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Gm18341-201ENSMUST00000197538 622 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Gm18921-201ENSMUST00000221798 366 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Rnf180Q3U827 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.55□□□□□ -1.84
Rnf180Q3U827 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Rnf180Q3U827 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Rnf180Q3U827 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Rnf180Q3U827 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.55□□□□□ -1.84
Rnf180Q3U827 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Mir682-201ENSMUST00000102281 96 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm24282-201ENSMUST00000104232 66 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm26015-201ENSMUST00000104402 125 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm14448-201ENSMUST00000116383 210 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm12686-201ENSMUST00000120546 397 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm23231-201ENSMUST00000157299 104 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm24601-201ENSMUST00000157970 143 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm25476-201ENSMUST00000175125 185 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Mir6715-201ENSMUST00000184990 57 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm29140-201ENSMUST00000190187 476 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm44343-201ENSMUST00000196702 90 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Snord14d-201ENSMUST00000083424 86 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.54□□□□□ -1.84
Rnf180Q3U827 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Rnf180Q3U827 Gm25875-201ENSMUST00000104323 107 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Gm15002-201ENSMUST00000118406 452 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Gm12042-201ENSMUST00000120479 301 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Gm26024-201ENSMUST00000158657 322 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Gm28825-201ENSMUST00000186233 238 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.53□□□□□ -1.84
Rnf180Q3U827 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Gm22062-201ENSMUST00000082563 107 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
Rnf180Q3U827 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.53□□□□□ -1.84
Rnf180Q3U827 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Rnf180Q3U827 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm25500-201ENSMUST00000104426 123 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm15714-201ENSMUST00000117168 250 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm11356-201ENSMUST00000118974 192 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm12771-201ENSMUST00000120246 135 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm25333-201ENSMUST00000158035 246 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm25749-201ENSMUST00000175485 111 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm20630-201ENSMUST00000177387 551 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm44524-201ENSMUST00000203899 271 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm45687-201ENSMUST00000209454 155 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm23727-201ENSMUST00000083352 164 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm25651-201ENSMUST00000083782 119 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm10212-201ENSMUST00000087884 324 ntBASIC3.52□□□□□ -1.85
Rnf180Q3U827 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rnf180Q3U827 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rnf180Q3U827 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rnf180Q3U827 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm25938-201ENSMUST00000104139 166 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm24640-201ENSMUST00000116949 126 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm22626-201ENSMUST00000116990 126 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm14894-201ENSMUST00000117170 270 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm13714-201ENSMUST00000117313 221 ntBASIC3.51□□□□□ -1.85
Rnf180Q3U827 Gm13210-201ENSMUST00000121483 273 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 129.7 ms