Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm25091-201ENSMUST00000103997 71 ntBASIC4.32□□□□□ -1.72
Col9a1Q05722 Gm22196-201ENSMUST00000116865 109 ntBASIC4.32□□□□□ -1.72
Col9a1Q05722 Gm14923-201ENSMUST00000118270 155 ntBASIC4.32□□□□□ -1.72
Col9a1Q05722 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.32□□□□□ -1.72
Col9a1Q05722 Gm26036-201ENSMUST00000158149 144 ntBASIC4.32□□□□□ -1.72
Col9a1Q05722 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.32□□□□□ -1.72
Col9a1Q05722 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.32□□□□□ -1.72
Col9a1Q05722 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col9a1Q05722 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col9a1Q05722 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col9a1Q05722 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.32□□□□□ -1.72
Col9a1Q05722 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col9a1Q05722 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col9a1Q05722 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col9a1Q05722 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm12513-201ENSMUST00000118617 352 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm13687-201ENSMUST00000119857 282 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm26253-201ENSMUST00000122493 103 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm23253-201ENSMUST00000157441 104 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm25491-201ENSMUST00000158733 308 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm25633-201ENSMUST00000178565 107 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm27869-201ENSMUST00000184327 122 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.31□□□□□ -1.72
Col9a1Q05722 AC127371.3-201ENSMUST00000228129 415 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm7117-201ENSMUST00000071515 387 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm22805-201ENSMUST00000082739 107 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm23377-201ENSMUST00000082943 126 ntBASIC4.31□□□□□ -1.72
Col9a1Q05722 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col9a1Q05722 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.3□□□□□ -1.72
Col9a1Q05722 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.3□□□□□ -1.72
Col9a1Q05722 Mir1195-201ENSMUST00000116818 98 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm22193-201ENSMUST00000116868 76 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm25059-201ENSMUST00000157367 117 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm26214-201ENSMUST00000158581 107 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm24277-201ENSMUST00000158661 104 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm28282-201ENSMUST00000186072 186 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm2522-201ENSMUST00000204280 322 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm44966-201ENSMUST00000208096 157 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Gm24099-201ENSMUST00000083384 107 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col9a1Q05722 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.3□□□□□ -1.72
Col9a1Q05722 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col9a1Q05722 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col9a1Q05722 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col9a1Q05722 Gm25828-201ENSMUST00000157087 95 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 Gm25825-201ENSMUST00000157091 124 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 Gm22228-201ENSMUST00000157364 101 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 Gm24878-201ENSMUST00000158782 104 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.29□□□□□ -1.72
Col9a1Q05722 Mir7667-201ENSMUST00000183866 63 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.29□□□□□ -1.72
Col9a1Q05722 Gm45006-201ENSMUST00000206078 690 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 AC133517.1-203ENSMUST00000225570 390 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 AC115735.1-201ENSMUST00000226633 350 ntBASIC4.29□□□□□ -1.72
Col9a1Q05722 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col9a1Q05722 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col9a1Q05722 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col9a1Q05722 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col9a1Q05722 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col9a1Q05722 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col9a1Q05722 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.28□□□□□ -1.72
Col9a1Q05722 Gm14282-201ENSMUST00000119484 240 ntBASIC4.28□□□□□ -1.72
Col9a1Q05722 Gm25835-201ENSMUST00000158917 144 ntBASIC4.28□□□□□ -1.72
Col9a1Q05722 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Snord59a-201ENSMUST00000082844 74 ntBASIC4.28□□□□□ -1.72
Col9a1Q05722 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col9a1Q05722 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col9a1Q05722 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Col9a1Q05722 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col9a1Q05722 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col9a1Q05722 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col9a1Q05722 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col9a1Q05722 Gm24468-201ENSMUST00000104489 104 ntBASIC4.27□□□□□ -1.73
Col9a1Q05722 Gm25846-201ENSMUST00000158013 135 ntBASIC4.27□□□□□ -1.73
Col9a1Q05722 Gm23859-201ENSMUST00000158383 64 ntBASIC4.27□□□□□ -1.73
Col9a1Q05722 Gm26498-201ENSMUST00000177799 79 ntBASIC4.27□□□□□ -1.73
Col9a1Q05722 Gm23567-201ENSMUST00000178005 107 ntBASIC4.27□□□□□ -1.73
Col9a1Q05722 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col9a1Q05722 Gm26230-201ENSMUST00000180141 79 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms