Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sox9Q04887 Gm12155-201ENSMUST00000121267 160 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm14402-201ENSMUST00000122217 508 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm23640-201ENSMUST00000157860 104 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm23933-201ENSMUST00000178405 79 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm21893-201ENSMUST00000179119 397 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm27698-201ENSMUST00000184060 249 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm27893-201ENSMUST00000184408 194 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.38□□□□□ -1.87
Sox9Q04887 Gm30674-201ENSMUST00000214523 392 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm24950-201ENSMUST00000082768 191 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm23971-201ENSMUST00000083317 191 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm23849-201ENSMUST00000083833 191 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm26316-201ENSMUST00000083886 191 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Gm10212-201ENSMUST00000087884 324 ntBASIC3.38□□□□□ -1.87
Sox9Q04887 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
Sox9Q04887 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Sox9Q04887 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Sox9Q04887 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Sox9Q04887 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Sox9Q04887 Gm22784-201ENSMUST00000104088 132 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Gm22658-201ENSMUST00000104196 155 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Gm15282-201ENSMUST00000117707 300 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Gm14838-201ENSMUST00000118913 248 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.37□□□□□ -1.87
Sox9Q04887 Gm24392-201ENSMUST00000158136 103 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Gm24667-201ENSMUST00000158938 103 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Mir7009-201ENSMUST00000184519 64 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Mir6540-201ENSMUST00000184886 108 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Sox9Q04887 Mir465d-201ENSMUST00000196314 58 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Gm44322-201ENSMUST00000196830 115 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Gm42739-201ENSMUST00000200687 226 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.37□□□□□ -1.87
Sox9Q04887 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.37□□□□□ -1.87
Sox9Q04887 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Sox9Q04887 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Sox9Q04887 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sox9Q04887 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Sox9Q04887 Gm24121-201ENSMUST00000102029 106 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm24116-201ENSMUST00000103975 107 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Mdga2-203ENSMUST00000113942 423 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm15183-201ENSMUST00000118933 348 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm24937-201ENSMUST00000122597 134 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm25805-201ENSMUST00000122788 108 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm23982-201ENSMUST00000157141 106 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm22336-201ENSMUST00000157719 107 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm22187-201ENSMUST00000157819 129 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm22099-201ENSMUST00000157925 123 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm22316-201ENSMUST00000158012 216 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Gm23219-201ENSMUST00000158123 87 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Sox9Q04887 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.36□□□□□ -1.87
Sox9Q04887 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Sox9Q04887 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Sox9Q04887 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Sox9Q04887 Gm13167-201ENSMUST00000118554 578 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm22482-201ENSMUST00000122563 359 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm25269-201ENSMUST00000122601 104 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm22026-201ENSMUST00000122735 281 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.35□□□□□ -1.87
Sox9Q04887 Gm26297-201ENSMUST00000179464 132 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm22450-201ENSMUST00000179641 107 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm25024-201ENSMUST00000179667 104 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm25473-201ENSMUST00000180191 107 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm35405-201ENSMUST00000218754 400 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm10092-201ENSMUST00000077110 180 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm24856-201ENSMUST00000082809 107 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 AF357341-201ENSMUST00000083088 75 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm26071-201ENSMUST00000083261 107 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm24521-201ENSMUST00000083958 107 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 Gm26327-201ENSMUST00000093724 111 ntBASIC3.35□□□□□ -1.87
Sox9Q04887 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Sox9Q04887 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Sox9Q04887 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Sox9Q04887 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Sox9Q04887 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Sox9Q04887 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Sox9Q04887 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Sox9Q04887 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.34□□□□□ -1.87
Sox9Q04887 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Sox9Q04887 Gm6574-201ENSMUST00000120037 362 ntBASIC3.34□□□□□ -1.87
Sox9Q04887 Gm12443-201ENSMUST00000122308 323 ntBASIC3.34□□□□□ -1.87
Sox9Q04887 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.34□□□□□ -1.87
Sox9Q04887 Gm24716-201ENSMUST00000157524 104 ntBASIC3.34□□□□□ -1.87
Sox9Q04887 Gm24056-201ENSMUST00000158617 146 ntBASIC3.34□□□□□ -1.87
Sox9Q04887 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Sox9Q04887 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Sox9Q04887 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Sox9Q04887 Gm17522-201ENSMUST00000178144 498 ntBASIC3.34□□□□□ -1.87
Sox9Q04887 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms