Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm14598-201ENSMUST00000180109 468 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm14625-201ENSMUST00000180231 468 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm23453-201ENSMUST00000083326 106 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.86□□□□□ -1.79
Col6a1Q04857 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a1Q04857 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a1Q04857 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a1Q04857 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm23013-201ENSMUST00000104146 106 ntBASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm12025-201ENSMUST00000117768 144 ntBASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm25543-201ENSMUST00000122678 312 ntBASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm23331-201ENSMUST00000157423 108 ntBASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm23668-201ENSMUST00000157465 111 ntBASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm26097-201ENSMUST00000179642 93 ntBASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm5829-201ENSMUST00000191383 351 ntBASIC3.85□□□□□ -1.79
Col6a1Q04857 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.85□□□□□ -1.79
Col6a1Q04857 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.85□□□□□ -1.79
Col6a1Q04857 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.85□□□□□ -1.79
Col6a1Q04857 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col6a1Q04857 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Col6a1Q04857 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.85□□□□□ -1.79
Col6a1Q04857 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a1Q04857 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a1Q04857 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col6a1Q04857 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
Col6a1Q04857 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col6a1Q04857 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm23651-201ENSMUST00000116755 120 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm15714-201ENSMUST00000117168 250 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm7123-201ENSMUST00000117647 213 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm16021-201ENSMUST00000121176 219 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm23791-201ENSMUST00000122553 293 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm22883-201ENSMUST00000157376 106 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm27753-201ENSMUST00000184742 203 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm44223-201ENSMUST00000204854 114 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm9377-201ENSMUST00000207227 623 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm18015-201ENSMUST00000214879 316 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm22507-201ENSMUST00000082773 160 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Snord35b-201ENSMUST00000082833 87 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Gm10351-201ENSMUST00000087694 125 ntBASIC3.84□□□□□ -1.79
Col6a1Q04857 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col6a1Q04857 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Col6a1Q04857 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.84□□□□□ -1.8
Col6a1Q04857 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.84□□□□□ -1.8
Col6a1Q04857 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Col6a1Q04857 Gm23123-201ENSMUST00000157648 144 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Gm23775-201ENSMUST00000158991 249 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Gm7582-201ENSMUST00000160831 603 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a1Q04857 Gm43239-201ENSMUST00000200131 201 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Gm43991-201ENSMUST00000203751 274 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Gm23615-201ENSMUST00000082602 65 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Gm25815-201ENSMUST00000082755 107 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Gm22970-201ENSMUST00000083304 186 ntBASIC3.83□□□□□ -1.8
Col6a1Q04857 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a1Q04857 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.83□□□□□ -1.8
Col6a1Q04857 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a1Q04857 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a1Q04857 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col6a1Q04857 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm22750-201ENSMUST00000102076 103 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm14811-201ENSMUST00000117070 117 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm15936-201ENSMUST00000118706 460 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm12934-201ENSMUST00000119221 343 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Mir1966-201ENSMUST00000158807 108 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm16162-201ENSMUST00000162296 297 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm27520-201ENSMUST00000184872 81 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm18982-201ENSMUST00000198118 529 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.82□□□□□ -1.8
Col6a1Q04857 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm23462-201ENSMUST00000083264 104 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a1Q04857 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a1Q04857 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.82□□□□□ -1.8
Col6a1Q04857 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a1Q04857 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a1Q04857 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a1Q04857 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Col6a1Q04857 Gm25938-201ENSMUST00000104139 166 ntBASIC3.81□□□□□ -1.8
Col6a1Q04857 Gm6762-201ENSMUST00000121769 289 ntBASIC3.81□□□□□ -1.8
Col6a1Q04857 Gm25424-201ENSMUST00000157612 58 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms