Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm22560-201ENSMUST00000157332 120 ntBASIC3.35□□□□□ -1.87
Msx2Q03358 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Msx2Q03358 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.35□□□□□ -1.87
Msx2Q03358 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.35□□□□□ -1.87
Msx2Q03358 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.35□□□□□ -1.87
Msx2Q03358 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Msx2Q03358 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Msx2Q03358 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Msx2Q03358 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Msx2Q03358 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Msx2Q03358 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.34□□□□□ -1.87
Msx2Q03358 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Msx2Q03358 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Msx2Q03358 Mir767-201ENSMUST00000103256 107 ntBASIC3.34□□□□□ -1.87
Msx2Q03358 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.34□□□□□ -1.87
Msx2Q03358 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Msx2Q03358 Gm24961-201ENSMUST00000157918 184 ntBASIC3.34□□□□□ -1.87
Msx2Q03358 Gm22075-201ENSMUST00000158599 192 ntBASIC3.34□□□□□ -1.87
Msx2Q03358 Gm25205-201ENSMUST00000082841 103 ntBASIC3.34□□□□□ -1.87
Msx2Q03358 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Msx2Q03358 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Msx2Q03358 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Msx2Q03358 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Msx2Q03358 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
Msx2Q03358 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Msx2Q03358 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Msx2Q03358 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Msx2Q03358 Gm23481-201ENSMUST00000104173 131 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Msx2Q03358 Gm12143-201ENSMUST00000119666 332 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm25386-201ENSMUST00000157814 288 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm24213-201ENSMUST00000158255 258 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm18486-201ENSMUST00000184040 298 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm27869-201ENSMUST00000184327 122 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm29005-201ENSMUST00000186773 320 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.33□□□□□ -1.88
Msx2Q03358 Gm28314-201ENSMUST00000191276 345 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Msx2Q03358 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.33□□□□□ -1.88
Msx2Q03358 Gm45687-201ENSMUST00000209454 155 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm45492-201ENSMUST00000211611 288 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm18000-201ENSMUST00000212153 800 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm25856-201ENSMUST00000082786 75 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm24453-201ENSMUST00000083346 76 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm10172-201ENSMUST00000085929 558 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Msx2Q03358 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.33□□□□□ -1.88
Msx2Q03358 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Msx2Q03358 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Msx2Q03358 Gm22758-201ENSMUST00000102275 96 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Msx2Q03358 Gm13167-201ENSMUST00000118554 578 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Gm15183-201ENSMUST00000118933 348 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Gm23671-201ENSMUST00000157472 103 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Gm27189-201ENSMUST00000184119 190 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Gm27648-201ENSMUST00000184315 107 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Gm44052-201ENSMUST00000203382 396 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Gm5010-201ENSMUST00000213131 260 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Gm22978-201ENSMUST00000082607 160 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Snord15a-201ENSMUST00000083888 148 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Mir488-201ENSMUST00000093595 109 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Gm23947-201ENSMUST00000093636 107 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Msx2Q03358 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Msx2Q03358 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.32□□□□□ -1.88
Msx2Q03358 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Msx2Q03358 Gm22051-201ENSMUST00000117002 127 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Gm5762-201ENSMUST00000119204 258 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Gm22204-201ENSMUST00000122654 327 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Gm26049-201ENSMUST00000157313 108 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Gm25267-201ENSMUST00000158522 63 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Gm44524-201ENSMUST00000203899 271 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Gm22507-201ENSMUST00000082773 160 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Snora2b-201ENSMUST00000084005 137 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Gm26327-201ENSMUST00000093724 111 ntBASIC3.31□□□□□ -1.88
Msx2Q03358 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Msx2Q03358 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Msx2Q03358 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.3□□□□□ -1.88
Msx2Q03358 Gm25089-201ENSMUST00000102015 79 ntBASIC3.3□□□□□ -1.88
Msx2Q03358 Gm23592-201ENSMUST00000157859 117 ntBASIC3.3□□□□□ -1.88
Msx2Q03358 Mir5136-201ENSMUST00000175573 76 ntBASIC3.3□□□□□ -1.88
Msx2Q03358 Gm25840-201ENSMUST00000177821 79 ntBASIC3.3□□□□□ -1.88
Msx2Q03358 Gm24952-201ENSMUST00000177909 79 ntBASIC3.3□□□□□ -1.88
Msx2Q03358 Gm23682-201ENSMUST00000178146 79 ntBASIC3.3□□□□□ -1.88
Msx2Q03358 Gm24652-201ENSMUST00000178223 79 ntBASIC3.3□□□□□ -1.88
Msx2Q03358 Gm22629-201ENSMUST00000178272 79 ntBASIC3.3□□□□□ -1.88
Msx2Q03358 Gm24021-201ENSMUST00000178435 79 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms