Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm18185-201ENSMUST00000186725 667 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm29350-201ENSMUST00000189141 541 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm37361-201ENSMUST00000194345 132 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm29950-201ENSMUST00000195273 237 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.16□□□□□ -2.22
Nkx3-1P97436 Snord43-201ENSMUST00000199549 108 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Nkx3-1P97436 Gm24035-201ENSMUST00000082867 107 ntBASIC1.16□□□□□ -2.22
Nkx3-1P97436 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Nkx3-1P97436 Gm25414-201ENSMUST00000101814 107 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm22780-201ENSMUST00000104084 132 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm11359-201ENSMUST00000120039 567 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm24348-201ENSMUST00000158710 130 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm16162-201ENSMUST00000162296 297 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm25457-201ENSMUST00000179509 107 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm22631-201ENSMUST00000179656 94 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Mir7052-201ENSMUST00000184821 65 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm28404-201ENSMUST00000190242 453 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm37923-201ENSMUST00000191624 161 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm45071-201ENSMUST00000205353 571 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm44923-201ENSMUST00000206673 85 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm45366-201ENSMUST00000209828 384 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm25586-201ENSMUST00000082499 112 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Gm25853-201ENSMUST00000082793 132 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Mir151-201ENSMUST00000083678 68 ntBASIC1.15□□□□□ -2.23
Nkx3-1P97436 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
Nkx3-1P97436 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm15266-201ENSMUST00000119635 255 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm13341-201ENSMUST00000120780 672 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm13903-201ENSMUST00000120945 193 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm11389-201ENSMUST00000121407 430 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm27396-201ENSMUST00000157708 58 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm23760-201ENSMUST00000158350 116 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm23181-201ENSMUST00000158685 110 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm22851-201ENSMUST00000178741 94 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm25074-201ENSMUST00000178782 94 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm18296-201ENSMUST00000192475 783 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm44336-201ENSMUST00000203696 468 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm44128-201ENSMUST00000204909 219 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm18854-201ENSMUST00000211196 329 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Nkx3-1P97436 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm18113-201ENSMUST00000220630 303 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm23246-201ENSMUST00000083371 67 ntBASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Nkx3-1P97436 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.14□□□□□ -2.23
Nkx3-1P97436 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm22673-201ENSMUST00000104415 131 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm15443-201ENSMUST00000118947 820 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm14766-201ENSMUST00000121689 367 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm23328-201ENSMUST00000157418 132 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Mir1949-201ENSMUST00000157434 141 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm22217-201ENSMUST00000157556 313 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm23586-201ENSMUST00000157657 123 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm24551-201ENSMUST00000158645 92 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm23636-201ENSMUST00000175070 95 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm9830-201ENSMUST00000178509 357 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.13□□□□□ -2.23
Nkx3-1P97436 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.13□□□□□ -2.23
Nkx3-1P97436 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm45116-201ENSMUST00000207392 275 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm45730-201ENSMUST00000212560 395 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm45815-201ENSMUST00000220241 146 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm35558-203ENSMUST00000222264 204 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm24624-201ENSMUST00000082617 164 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm23453-201ENSMUST00000083326 106 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm22577-201ENSMUST00000083731 109 ntBASIC1.13□□□□□ -2.23
Nkx3-1P97436 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.13□□□□□ -2.23
Nkx3-1P97436 Gm25541-201ENSMUST00000116888 126 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm25507-201ENSMUST00000116981 144 ntBASIC1.12□□□□□ -2.23
Nkx3-1P97436 Gm12370-201ENSMUST00000117809 604 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms