Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Tpm1P58771 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.18□□□□□ -2.22
Tpm1P58771 Gm24292-201ENSMUST00000082888 107 ntBASIC1.18□□□□□ -2.22
Tpm1P58771 Snord118-201ENSMUST00000082965 135 ntBASIC1.18□□□□□ -2.22
Tpm1P58771 Gm23453-201ENSMUST00000083326 106 ntBASIC1.18□□□□□ -2.22
Tpm1P58771 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Tpm1P58771 Gm23422-201ENSMUST00000102000 107 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Mir301b-201ENSMUST00000102333 97 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Tpm1P58771 Gm23336-201ENSMUST00000117023 123 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm15077-201ENSMUST00000122344 362 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm25269-201ENSMUST00000122601 104 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm23317-201ENSMUST00000157999 129 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm26405-201ENSMUST00000158495 100 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm25956-201ENSMUST00000175115 217 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Mir6381-201ENSMUST00000183426 87 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Mir7063-201ENSMUST00000184158 91 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm27419-201ENSMUST00000184576 109 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm9156-201ENSMUST00000189660 463 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.17□□□□□ -2.22
Tpm1P58771 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Tpm1P58771 Gm24536-201ENSMUST00000083144 107 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm22972-201ENSMUST00000083297 131 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Tpm1P58771 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.17□□□□□ -2.22
Tpm1P58771 Gm15659-201ENSMUST00000118881 341 ntBASIC1.16□□□□□ -2.22
Tpm1P58771 Gm15443-201ENSMUST00000118947 820 ntBASIC1.16□□□□□ -2.22
Tpm1P58771 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Tpm1P58771 Gm24862-201ENSMUST00000179103 79 ntBASIC1.16□□□□□ -2.22
Tpm1P58771 Gm23310-201ENSMUST00000179105 79 ntBASIC1.16□□□□□ -2.22
Tpm1P58771 Gm25461-201ENSMUST00000179293 79 ntBASIC1.16□□□□□ -2.22
Tpm1P58771 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Tpm1P58771 Gm24518-201ENSMUST00000180275 94 ntBASIC1.16□□□□□ -2.22
Tpm1P58771 Gm28912-201ENSMUST00000189001 234 ntBASIC1.16□□□□□ -2.22
Tpm1P58771 Gm22229-201ENSMUST00000082987 108 ntBASIC1.16□□□□□ -2.22
Tpm1P58771 Mir340-201ENSMUST00000083483 98 ntBASIC1.16□□□□□ -2.22
Tpm1P58771 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.16□□□□□ -2.22
Tpm1P58771 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Tpm1P58771 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Gm11363-201ENSMUST00000121672 548 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Gm22073-201ENSMUST00000122668 189 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.15□□□□□ -2.23
Tpm1P58771 Gm22221-201ENSMUST00000157362 103 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Gm23120-201ENSMUST00000157654 287 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Gm24366-201ENSMUST00000175383 86 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Gm43245-201ENSMUST00000197603 468 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Gm43739-201ENSMUST00000198294 307 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Gm44870-201ENSMUST00000207291 357 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Gm45382-201ENSMUST00000210607 151 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.15□□□□□ -2.23
Tpm1P58771 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Tpm1P58771 Mir374b-201ENSMUST00000102314 95 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Mir544-201ENSMUST00000103813 78 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Gm22817-201ENSMUST00000157448 356 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Gm23083-201ENSMUST00000157851 116 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Gm20689-201ENSMUST00000176033 279 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Tpm1P58771 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Tpm1P58771 Gm42570-201ENSMUST00000195937 292 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Gm43427-201ENSMUST00000198188 331 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Gm25683-201ENSMUST00000083940 131 ntBASIC1.14□□□□□ -2.23
Tpm1P58771 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.13□□□□□ -2.23
Tpm1P58771 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.13□□□□□ -2.23
Tpm1P58771 Gm18396-201ENSMUST00000177095 361 ntBASIC1.13□□□□□ -2.23
Tpm1P58771 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
Tpm1P58771 Gm43035-201ENSMUST00000197626 517 ntBASIC1.13□□□□□ -2.23
Tpm1P58771 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.13□□□□□ -2.23
Tpm1P58771 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Tpm1P58771 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
Tpm1P58771 Gm26228-201ENSMUST00000082512 107 ntBASIC1.13□□□□□ -2.23
Tpm1P58771 Gm25080-201ENSMUST00000082526 107 ntBASIC1.13□□□□□ -2.23
Tpm1P58771 Snora34-201ENSMUST00000083402 138 ntBASIC1.13□□□□□ -2.23
Tpm1P58771 Gm25518-201ENSMUST00000083864 107 ntBASIC1.13□□□□□ -2.23
Tpm1P58771 Gm23015-201ENSMUST00000104145 128 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Gm13992-201ENSMUST00000120558 156 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Gm12779-201ENSMUST00000121496 143 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Gm23124-201ENSMUST00000157650 107 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Gm22556-201ENSMUST00000157803 100 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Rnu7-201ENSMUST00000158458 62 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Gm24638-201ENSMUST00000179807 132 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Mir6380-201ENSMUST00000184334 81 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Gm28409-201ENSMUST00000187064 103 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Gm45366-201ENSMUST00000209828 384 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Gm25038-201ENSMUST00000082928 130 ntBASIC1.12□□□□□ -2.23
Tpm1P58771 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Tpm1P58771 Gm23670-201ENSMUST00000157469 119 ntBASIC1.11□□□□□ -2.23
Tpm1P58771 Gm25557-201ENSMUST00000158084 315 ntBASIC1.11□□□□□ -2.23
Tpm1P58771 Gm26038-201ENSMUST00000158151 106 ntBASIC1.11□□□□□ -2.23
Tpm1P58771 Gm25371-201ENSMUST00000158162 101 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms