Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm24448-201ENSMUST00000083979 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm22886-201ENSMUST00000093714 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NcanP55066 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
NcanP55066 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NcanP55066 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
NcanP55066 Gm24275-201ENSMUST00000116780 146 ntBASIC2.43□□□□□ -2.02
NcanP55066 Gm15896-201ENSMUST00000118045 440 ntBASIC2.43□□□□□ -2.02
NcanP55066 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.43□□□□□ -2.02
NcanP55066 Mir6353-201ENSMUST00000183596 113 ntBASIC2.43□□□□□ -2.02
NcanP55066 Gm10105-201ENSMUST00000184601 270 ntBASIC2.43□□□□□ -2.02
NcanP55066 Gm28794-201ENSMUST00000185276 136 ntBASIC2.43□□□□□ -2.02
NcanP55066 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.43□□□□□ -2.02
NcanP55066 Gm9402-201ENSMUST00000196849 388 ntBASIC2.43□□□□□ -2.02
NcanP55066 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.43□□□□□ -2.02
NcanP55066 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.43□□□□□ -2.02
NcanP55066 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.43□□□□□ -2.02
NcanP55066 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.43□□□□□ -2.02
NcanP55066 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.43□□□□□ -2.02
NcanP55066 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.43□□□□□ -2.02
NcanP55066 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.43□□□□□ -2.02
NcanP55066 Snord14d-201ENSMUST00000083424 86 ntBASIC2.43□□□□□ -2.02
NcanP55066 Gm23345-201ENSMUST00000083817 150 ntBASIC2.43□□□□□ -2.02
NcanP55066 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NcanP55066 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
NcanP55066 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.42□□□□□ -2.02
NcanP55066 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
NcanP55066 Gm22486-201ENSMUST00000116815 137 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm7164-201ENSMUST00000117503 450 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm14837-201ENSMUST00000119688 206 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm13409-201ENSMUST00000122072 546 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm25325-201ENSMUST00000122559 86 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm24010-201ENSMUST00000157731 282 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm22434-201ENSMUST00000158549 122 ntBASIC2.42□□□□□ -2.02
NcanP55066 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NcanP55066 Gm3027-201ENSMUST00000167579 451 ntBASIC2.42□□□□□ -2.02
NcanP55066 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.42□□□□□ -2.02
NcanP55066 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.42□□□□□ -2.02
NcanP55066 Mir5099-201ENSMUST00000175257 74 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm6660-201ENSMUST00000179149 468 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.42□□□□□ -2.02
NcanP55066 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.42□□□□□ -2.02
NcanP55066 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NcanP55066 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.42□□□□□ -2.02
NcanP55066 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
NcanP55066 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm25079-201ENSMUST00000082529 203 ntBASIC2.42□□□□□ -2.02
NcanP55066 Gm23096-201ENSMUST00000083447 107 ntBASIC2.42□□□□□ -2.02
NcanP55066 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
NcanP55066 Gm25827-201ENSMUST00000157089 107 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm22791-201ENSMUST00000157232 145 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm24192-201ENSMUST00000157978 145 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm26402-201ENSMUST00000158499 113 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.41□□□□□ -2.02
NcanP55066 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NcanP55066 Gm26501-201ENSMUST00000178307 107 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm23933-201ENSMUST00000178405 79 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm26180-201ENSMUST00000179942 107 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm26864-201ENSMUST00000181346 156 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm28016-201ENSMUST00000184594 196 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm5329-201ENSMUST00000186898 463 ntBASIC2.41□□□□□ -2.02
NcanP55066 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.41□□□□□ -2.02
NcanP55066 Gm23370-202ENSMUST00000197008 129 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm43035-201ENSMUST00000197626 517 ntBASIC2.41□□□□□ -2.02
NcanP55066 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
NcanP55066 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.41□□□□□ -2.02
NcanP55066 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.41□□□□□ -2.02
NcanP55066 Gm24445-201ENSMUST00000083981 107 ntBASIC2.41□□□□□ -2.02
NcanP55066 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
NcanP55066 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
NcanP55066 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
NcanP55066 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.41□□□□□ -2.02
NcanP55066 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NcanP55066 Gm12765-201ENSMUST00000117273 615 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm16242-201ENSMUST00000117741 334 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm26256-201ENSMUST00000122499 186 ntBASIC2.4□□□□□ -2.03
NcanP55066 Mir1942-201ENSMUST00000157274 63 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm23713-201ENSMUST00000157353 70 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm23557-201ENSMUST00000157820 138 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm24997-201ENSMUST00000157910 105 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm24857-201ENSMUST00000158061 310 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm22328-201ENSMUST00000158074 112 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm22615-201ENSMUST00000158102 70 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm27510-201ENSMUST00000158214 64 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm17065-201ENSMUST00000165245 239 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
NcanP55066 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NcanP55066 Gm5900-201ENSMUST00000179862 375 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm6060-201ENSMUST00000188671 251 ntBASIC2.4□□□□□ -2.03
NcanP55066 Gm8031-201ENSMUST00000213430 626 ntBASIC2.4□□□□□ -2.03
NcanP55066 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.4□□□□□ -2.03
NcanP55066 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.4□□□□□ -2.03
NcanP55066 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NcanP55066 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
NcanP55066 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NcanP55066 Gm25526-201ENSMUST00000104332 132 ntBASIC2.39□□□□□ -2.03
NcanP55066 Snord98-201ENSMUST00000116819 65 ntBASIC2.39□□□□□ -2.03
NcanP55066 Gm13432-201ENSMUST00000118861 241 ntBASIC2.39□□□□□ -2.03
NcanP55066 Gm12512-201ENSMUST00000119620 217 ntBASIC2.39□□□□□ -2.03
NcanP55066 Gm14269-201ENSMUST00000120455 306 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms