Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm14803-201ENSMUST00000117163 361 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Gm15183-201ENSMUST00000118933 348 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Gm26027-201ENSMUST00000122725 268 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Mir6370-201ENSMUST00000183510 120 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Gm27249-201ENSMUST00000185049 328 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.37□□□□□ -1.87
Usp4P35123 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usp4P35123 Gm43680-201ENSMUST00000199466 340 ntBASIC3.37□□□□□ -1.87
Usp4P35123 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Mir137-201ENSMUST00000083635 73 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Mir471-201ENSMUST00000093596 67 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.37□□□□□ -1.87
Usp4P35123 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usp4P35123 Gm12934-201ENSMUST00000119221 343 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Gm23791-201ENSMUST00000122553 293 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Gm26412-201ENSMUST00000157666 55 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Gm22316-201ENSMUST00000158012 216 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Usp4P35123 Mir3106-201ENSMUST00000175401 82 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Gm25615-201ENSMUST00000177836 94 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Mir6993-201ENSMUST00000184912 65 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Mir7062-201ENSMUST00000185038 66 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Gm28627-201ENSMUST00000186141 453 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Gm28825-201ENSMUST00000186233 238 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.36□□□□□ -1.87
Usp4P35123 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.36□□□□□ -1.87
Usp4P35123 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Gm24356-201ENSMUST00000082859 106 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Gm26495-201ENSMUST00000083152 137 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.36□□□□□ -1.87
Usp4P35123 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usp4P35123 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Usp4P35123 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Usp4P35123 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Usp4P35123 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Usp4P35123 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Usp4P35123 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Usp4P35123 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Usp4P35123 Gm22023-201ENSMUST00000104354 130 ntBASIC3.35□□□□□ -1.87
Usp4P35123 Gm12412-201ENSMUST00000121867 328 ntBASIC3.35□□□□□ -1.87
Usp4P35123 Gm24716-201ENSMUST00000157524 104 ntBASIC3.35□□□□□ -1.87
Usp4P35123 Gm22910-201ENSMUST00000178568 132 ntBASIC3.35□□□□□ -1.87
Usp4P35123 Gm37428-201ENSMUST00000193886 137 ntBASIC3.35□□□□□ -1.87
Usp4P35123 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.35□□□□□ -1.87
Usp4P35123 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.35□□□□□ -1.87
Usp4P35123 Gm26204-201ENSMUST00000082906 107 ntBASIC3.35□□□□□ -1.87
Usp4P35123 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.35□□□□□ -1.87
Usp4P35123 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Usp4P35123 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Usp4P35123 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Usp4P35123 Snord19-201ENSMUST00000104609 76 ntBASIC3.34□□□□□ -1.87
Usp4P35123 Gm12954-201ENSMUST00000118610 611 ntBASIC3.34□□□□□ -1.87
Usp4P35123 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.34□□□□□ -1.87
Usp4P35123 Gm23350-201ENSMUST00000158429 103 ntBASIC3.34□□□□□ -1.87
Usp4P35123 Gm37624-201ENSMUST00000193751 219 ntBASIC3.34□□□□□ -1.87
Usp4P35123 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Usp4P35123 Gm18000-201ENSMUST00000212153 800 ntBASIC3.34□□□□□ -1.87
Usp4P35123 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Usp4P35123 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.34□□□□□ -1.87
Usp4P35123 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Usp4P35123 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Usp4P35123 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Usp4P35123 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.34□□□□□ -1.88
Usp4P35123 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.33□□□□□ -1.88
Usp4P35123 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Usp4P35123 Gm25538-201ENSMUST00000101943 107 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Gm6762-201ENSMUST00000121769 289 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Gm24594-201ENSMUST00000122502 99 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Gm24213-201ENSMUST00000158255 258 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Gm38183-201ENSMUST00000193189 205 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Gm18341-201ENSMUST00000197538 622 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Gm44524-201ENSMUST00000203899 271 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Gm6796-201ENSMUST00000211919 243 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Gm19790-201ENSMUST00000214414 251 ntBASIC3.33□□□□□ -1.88
Usp4P35123 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.33□□□□□ -1.88
Usp4P35123 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.33□□□□□ -1.88
Usp4P35123 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.33□□□□□ -1.88
Usp4P35123 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.33□□□□□ -1.88
Usp4P35123 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Usp4P35123 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Usp4P35123 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Usp4P35123 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Usp4P35123 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.32□□□□□ -1.88
Usp4P35123 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Usp4P35123 Gm14020-201ENSMUST00000118165 662 ntBASIC3.32□□□□□ -1.88
Usp4P35123 Gm23466-201ENSMUST00000157133 106 ntBASIC3.32□□□□□ -1.88
Usp4P35123 Gm23559-201ENSMUST00000157824 103 ntBASIC3.32□□□□□ -1.88
Usp4P35123 Gm23571-201ENSMUST00000180073 127 ntBASIC3.32□□□□□ -1.88
Usp4P35123 Gm29005-201ENSMUST00000186773 320 ntBASIC3.32□□□□□ -1.88
Usp4P35123 Gm43899-201ENSMUST00000203675 246 ntBASIC3.32□□□□□ -1.88
Usp4P35123 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.32□□□□□ -1.88
Usp4P35123 Gm23738-201ENSMUST00000082828 171 ntBASIC3.32□□□□□ -1.88
Usp4P35123 Gm22443-201ENSMUST00000082890 107 ntBASIC3.32□□□□□ -1.88
Usp4P35123 Gm22704-201ENSMUST00000083027 137 ntBASIC3.32□□□□□ -1.88
Usp4P35123 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Usp4P35123 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Usp4P35123 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms