Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.58□□□□□ -2
Hoxc11P31313 Gm24504-201ENSMUST00000157679 100 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Gm17100-201ENSMUST00000168963 272 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Mir28b-201ENSMUST00000175399 80 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Gm22800-201ENSMUST00000175627 94 ntBASIC2.57□□□□□ -2
Hoxc11P31313 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.57□□□□□ -2
Hoxc11P31313 Mir6399-201ENSMUST00000184050 84 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Gm28995-201ENSMUST00000186625 261 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Gm28717-201ENSMUST00000189950 315 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Gm28848-201ENSMUST00000189984 168 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Gm37807-201ENSMUST00000194310 190 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Gm45791-201ENSMUST00000212908 352 ntBASIC2.57□□□□□ -2
Hoxc11P31313 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.57□□□□□ -2
Hoxc11P31313 AC154245.1-201ENSMUST00000224615 601 ntBASIC2.57□□□□□ -2
Hoxc11P31313 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hoxc11P31313 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Hoxc11P31313 Gm25937-201ENSMUST00000083912 107 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.57□□□□□ -2
Hoxc11P31313 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Hoxc11P31313 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.57□□□□□ -2
Hoxc11P31313 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Hoxc11P31313 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.56□□□□□ -2
Hoxc11P31313 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Hoxc11P31313 Mir682-201ENSMUST00000102281 96 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hoxc11P31313 Mir466k-201ENSMUST00000116774 122 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Gm22486-201ENSMUST00000116815 137 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Gm15365-201ENSMUST00000122392 300 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Gm26255-201ENSMUST00000122492 103 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Gm24892-201ENSMUST00000122747 104 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Snord53-201ENSMUST00000175146 78 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Gm24487-201ENSMUST00000178017 63 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Mir7215-201ENSMUST00000200383 51 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Gm43978-201ENSMUST00000203491 451 ntBASIC2.56□□□□□ -2
Hoxc11P31313 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.56□□□□□ -2
Hoxc11P31313 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.56□□□□□ -2
Hoxc11P31313 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.56□□□□□ -2
Hoxc11P31313 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Mir496a-201ENSMUST00000093627 79 ntBASIC2.56□□□□□ -2
Hoxc11P31313 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hoxc11P31313 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Hoxc11P31313 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Hoxc11P31313 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hoxc11P31313 Gm25321-201ENSMUST00000122558 102 ntBASIC2.55□□□□□ -2
Hoxc11P31313 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.55□□□□□ -2
Hoxc11P31313 Gm25961-201ENSMUST00000157174 135 ntBASIC2.55□□□□□ -2
Hoxc11P31313 Gm23599-201ENSMUST00000157261 251 ntBASIC2.55□□□□□ -2
Hoxc11P31313 Mir3076-201ENSMUST00000175415 60 ntBASIC2.55□□□□□ -2
Hoxc11P31313 Gm27786-201ENSMUST00000184337 70 ntBASIC2.55□□□□□ -2
Hoxc11P31313 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.55□□□□□ -2
Hoxc11P31313 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.55□□□□□ -2
Hoxc11P31313 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.55□□□□□ -2
Hoxc11P31313 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC2.55□□□□□ -2
Hoxc11P31313 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.55□□□□□ -2
Hoxc11P31313 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hoxc11P31313 Gm25888-201ENSMUST00000157778 302 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Gm22330-201ENSMUST00000158068 115 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Gm24737-201ENSMUST00000158861 100 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Mir3103-201ENSMUST00000175474 67 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Gm26914-201ENSMUST00000182262 223 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Gm28900-201ENSMUST00000185232 156 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Gm34015-201ENSMUST00000194908 451 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
Hoxc11P31313 Gm7240-201ENSMUST00000220769 664 ntBASIC2.54□□□□□ -2
Hoxc11P31313 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.54□□□□□ -2
Hoxc11P31313 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.54□□□□□ -2
Hoxc11P31313 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Gm22622-201ENSMUST00000082870 129 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.54□□□□□ -2
Hoxc11P31313 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.54□□□□□ -2
Hoxc11P31313 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Hoxc11P31313 Gm24049-201ENSMUST00000102409 100 ntBASIC2.53□□□□□ -2
Hoxc11P31313 Mir759-201ENSMUST00000103254 98 ntBASIC2.53□□□□□ -2
Hoxc11P31313 Gm24275-201ENSMUST00000116780 146 ntBASIC2.53□□□□□ -2
Hoxc11P31313 Gm22491-201ENSMUST00000157190 102 ntBASIC2.53□□□□□ -2
Hoxc11P31313 Gm22843-201ENSMUST00000157710 134 ntBASIC2.53□□□□□ -2
Hoxc11P31313 Gm24724-201ENSMUST00000158230 107 ntBASIC2.53□□□□□ -2
Hoxc11P31313 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm25933-201ENSMUST00000178943 108 ntBASIC2.53□□□□□ -2
Hoxc11P31313 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm25284-201ENSMUST00000180345 141 ntBASIC2.53□□□□□ -2
Hoxc11P31313 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm28661-201ENSMUST00000188231 681 ntBASIC2.53□□□□□ -2
Hoxc11P31313 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.53□□□□□ -2
Hoxc11P31313 Gm45522-201ENSMUST00000210784 166 ntBASIC2.53□□□□□ -2
Hoxc11P31313 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 153.2 ms