Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm44453-201ENSMUST00000175161 126 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Gm25195-201ENSMUST00000177656 126 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Gm10067-201ENSMUST00000179462 348 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Mir6399-201ENSMUST00000184050 84 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Gm27668-201ENSMUST00000184188 120 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Trbv18-201ENSMUST00000194256 294 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Gm38356-201ENSMUST00000194313 408 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Gm44099-201ENSMUST00000203299 112 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.68□□□□□ -1.82
Hoxd9P28357 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.68□□□□□ -1.82
Hoxd9P28357 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Hoxd9P28357 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hoxd9P28357 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hoxd9P28357 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.68□□□□□ -1.82
Hoxd9P28357 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hoxd9P28357 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hoxd9P28357 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hoxd9P28357 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm11644-201ENSMUST00000119735 150 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm13868-201ENSMUST00000122411 294 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm22792-201ENSMUST00000157225 133 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm23230-201ENSMUST00000157298 133 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm23101-201ENSMUST00000157550 137 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm29452-201ENSMUST00000187996 313 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm43381-201ENSMUST00000198553 165 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm44294-201ENSMUST00000205090 728 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm45796-201ENSMUST00000212483 114 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.67□□□□□ -1.82
Hoxd9P28357 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Hoxd9P28357 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd9P28357 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hoxd9P28357 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.67□□□□□ -1.82
Hoxd9P28357 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hoxd9P28357 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hoxd9P28357 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Hoxd9P28357 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm26421-201ENSMUST00000104279 132 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm23907-201ENSMUST00000104595 189 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm12013-201ENSMUST00000121971 155 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm23231-201ENSMUST00000157299 104 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm22586-201ENSMUST00000157507 122 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm24739-201ENSMUST00000158855 292 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hoxd9P28357 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.66□□□□□ -1.82
Hoxd9P28357 Mir5710-201ENSMUST00000176884 69 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm23860-201ENSMUST00000179446 132 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm27828-201ENSMUST00000184108 119 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm27520-201ENSMUST00000184872 81 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm18665-201ENSMUST00000189783 270 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 AC147101.2-201ENSMUST00000219756 184 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hoxd9P28357 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Hoxd9P28357 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.66□□□□□ -1.82
Hoxd9P28357 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Hoxd9P28357 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.65□□□□□ -1.82
Hoxd9P28357 Gm14020-201ENSMUST00000118165 662 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm11566-201ENSMUST00000118550 203 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm22612-201ENSMUST00000158293 101 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm23702-201ENSMUST00000158840 130 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm23504-201ENSMUST00000158988 95 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm10357-201ENSMUST00000159886 264 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm22510-201ENSMUST00000179304 79 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm26336-201ENSMUST00000179449 79 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm26390-201ENSMUST00000179628 79 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm18546-201ENSMUST00000197245 676 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm45162-201ENSMUST00000209013 618 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm22299-201ENSMUST00000082663 136 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm23518-201ENSMUST00000082835 153 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Gm22686-201ENSMUST00000082847 100 ntBASIC3.65□□□□□ -1.83
Hoxd9P28357 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Hoxd9P28357 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Hoxd9P28357 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Hoxd9P28357 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Hoxd9P28357 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.64□□□□□ -1.83
Hoxd9P28357 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Hoxd9P28357 Gm26273-201ENSMUST00000104180 131 ntBASIC3.64□□□□□ -1.83
Hoxd9P28357 Gm26418-201ENSMUST00000104275 137 ntBASIC3.64□□□□□ -1.83
Hoxd9P28357 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.64□□□□□ -1.83
Hoxd9P28357 Gm23112-201ENSMUST00000158606 125 ntBASIC3.64□□□□□ -1.83
Hoxd9P28357 Gm22889-201ENSMUST00000158639 58 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms