Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm15861-201ENSMUST00000120979 339 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm14972-201ENSMUST00000121780 364 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm25163-201ENSMUST00000158905 104 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm20438-201ENSMUST00000174441 329 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm9830-201ENSMUST00000178509 357 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Mir195b-201ENSMUST00000184814 97 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm37658-201ENSMUST00000192672 315 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm43245-201ENSMUST00000197603 468 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.38□□□□□ -2.19
Sdc1P18828 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Sdc1P18828 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm15526-201ENSMUST00000112504 204 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm25863-201ENSMUST00000158249 329 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Sdc1P18828 Gm21754-201ENSMUST00000177550 479 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm21737-201ENSMUST00000178112 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm22510-201ENSMUST00000179304 79 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm26336-201ENSMUST00000179449 79 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm26390-201ENSMUST00000179628 79 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm21729-201ENSMUST00000180058 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm21853-201ENSMUST00000180071 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm20901-201ENSMUST00000180177 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm29073-201ENSMUST00000185563 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm29495-201ENSMUST00000189319 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm28090-201ENSMUST00000189458 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm21647-201ENSMUST00000189755 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm29165-201ENSMUST00000190655 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Gm29211-201ENSMUST00000191470 664 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Sdc1P18828 Gm24977-201ENSMUST00000083106 163 ntBASIC1.37□□□□□ -2.19
Sdc1P18828 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Sdc1P18828 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Sdc1P18828 Gm24274-201ENSMUST00000116787 124 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm25541-201ENSMUST00000116888 126 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm11389-201ENSMUST00000121407 430 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm23120-201ENSMUST00000157654 287 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm24191-201ENSMUST00000157977 122 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.36□□□□□ -2.19
Sdc1P18828 Gm26501-201ENSMUST00000178307 107 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm28453-203ENSMUST00000187041 189 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Sdc1P18828 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm44337-201ENSMUST00000196553 114 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Mir1291-201ENSMUST00000199842 117 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm44962-201ENSMUST00000206460 279 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
Sdc1P18828 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm24406-201ENSMUST00000083026 128 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Snora34-201ENSMUST00000083402 138 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm25896-201ENSMUST00000083713 136 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Gm25651-201ENSMUST00000083782 119 ntBASIC1.36□□□□□ -2.19
Sdc1P18828 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Sdc1P18828 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm25992-201ENSMUST00000102437 109 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm25507-201ENSMUST00000116981 144 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm13432-201ENSMUST00000118861 241 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm14766-201ENSMUST00000121689 367 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm25054-201ENSMUST00000157370 97 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm23411-201ENSMUST00000157988 62 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm22315-201ENSMUST00000158010 143 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm22316-201ENSMUST00000158012 216 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm24851-201ENSMUST00000158028 103 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Mir7081-201ENSMUST00000184490 75 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Mir6901-201ENSMUST00000185062 62 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Sdc1P18828 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm45013-201ENSMUST00000206883 178 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm44533-201ENSMUST00000207782 268 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm45344-201ENSMUST00000211610 341 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm46312-201ENSMUST00000220961 420 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm24623-201ENSMUST00000082616 194 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Mir340-201ENSMUST00000083483 98 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Sdc1P18828 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.35□□□□□ -2.19
Sdc1P18828 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 Gm13714-201ENSMUST00000117313 221 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 Gm22793-201ENSMUST00000157227 330 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 Mir3057-201ENSMUST00000175040 91 ntBASIC1.34□□□□□ -2.19
Sdc1P18828 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms