Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Mir7675-201ENSMUST00000184262 58 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.58□□□□□ -2.32
Col1a1P11087 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Gm22062-201ENSMUST00000082563 107 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Snord96a-201ENSMUST00000082791 81 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Gm22974-201ENSMUST00000083301 103 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 Gm14600-201ENSMUST00000121032 630 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 Gm3025-201ENSMUST00000163454 489 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.57□□□□□ -2.32
Col1a1P11087 Gm3111-201ENSMUST00000167426 490 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 Gm25933-201ENSMUST00000178943 108 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 Gm21978-201ENSMUST00000179696 377 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 Gm38113-201ENSMUST00000193704 201 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.57□□□□□ -2.32
Col1a1P11087 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.56□□□□□ -2.32
Col1a1P11087 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Col1a1P11087 Gm25457-201ENSMUST00000179509 107 ntBASIC0.56□□□□□ -2.32
Col1a1P11087 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.56□□□□□ -2.32
Col1a1P11087 Gm28344-201ENSMUST00000185704 279 ntBASIC0.56□□□□□ -2.32
Col1a1P11087 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.56□□□□□ -2.32
Col1a1P11087 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.56□□□□□ -2.32
Col1a1P11087 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.56□□□□□ -2.32
Col1a1P11087 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.56□□□□□ -2.32
Col1a1P11087 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.56□□□□□ -2.32
Col1a1P11087 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.56□□□□□ -2.32
Col1a1P11087 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.56□□□□□ -2.32
Col1a1P11087 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Col1a1P11087 Gm12825-201ENSMUST00000120249 563 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Col1a1P11087 Gm26487-201ENSMUST00000158022 94 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm24773-201ENSMUST00000158513 99 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.55□□□□□ -2.32
Col1a1P11087 Gm27861-201ENSMUST00000183920 214 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Mir6388-201ENSMUST00000184417 75 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm18356-201ENSMUST00000185677 623 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm34139-201ENSMUST00000196166 294 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm44055-201ENSMUST00000204376 247 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm45101-201ENSMUST00000208327 232 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm23452-201ENSMUST00000083327 107 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm23058-201ENSMUST00000093703 107 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.55□□□□□ -2.32
Col1a1P11087 Gm12304-201ENSMUST00000120312 385 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm11891-201ENSMUST00000121241 619 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.54□□□□□ -2.32
Col1a1P11087 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.54□□□□□ -2.32
Col1a1P11087 Gm23956-201ENSMUST00000157211 119 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm22164-201ENSMUST00000158413 106 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Col1a1P11087 Gm42647-201ENSMUST00000195939 459 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm43432-201ENSMUST00000196352 121 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm44828-201ENSMUST00000203745 106 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.54□□□□□ -2.32
Col1a1P11087 Gm23042-201ENSMUST00000083866 101 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Snord35a-201ENSMUST00000083884 90 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Col1a1P11087 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm12370-201ENSMUST00000117809 604 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm14852-201ENSMUST00000120065 647 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm24385-201ENSMUST00000122694 350 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm24851-201ENSMUST00000158028 103 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC0.54□□□□□ -2.32
Col1a1P11087 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Col1a1P11087 Gm28995-201ENSMUST00000186625 261 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Col1a1P11087 Gm44482-201ENSMUST00000199232 103 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm24622-201ENSMUST00000082619 162 ntBASIC0.54□□□□□ -2.32
Col1a1P11087 Gm23749-201ENSMUST00000104223 131 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 Gm12053-201ENSMUST00000119022 252 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 Gm14554-201ENSMUST00000119548 661 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 Gm14913-201ENSMUST00000120011 1093 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 Gm15214-201ENSMUST00000122155 470 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.53□□□□□ -2.33
Col1a1P11087 Mir1942-201ENSMUST00000157274 63 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.33
Col1a1P11087 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 Gm22800-201ENSMUST00000175627 94 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 Mir6335-201ENSMUST00000184081 98 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.53□□□□□ -2.33
Col1a1P11087 Mir544-201ENSMUST00000103813 78 ntBASIC0.52□□□□□ -2.33
Col1a1P11087 Gm24997-201ENSMUST00000157910 105 ntBASIC0.52□□□□□ -2.33
Col1a1P11087 Gm26038-201ENSMUST00000158151 106 ntBASIC0.52□□□□□ -2.33
Col1a1P11087 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.52□□□□□ -2.33
Col1a1P11087 Gm44336-201ENSMUST00000203696 468 ntBASIC0.52□□□□□ -2.33
Col1a1P11087 Gm44088-201ENSMUST00000204595 237 ntBASIC0.52□□□□□ -2.33
Col1a1P11087 Gm45907-201ENSMUST00000213023 193 ntBASIC0.52□□□□□ -2.33
Col1a1P11087 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.52□□□□□ -2.33
Col1a1P11087 Gm30738-201ENSMUST00000221346 502 ntBASIC0.52□□□□□ -2.33
Col1a1P11087 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms