Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm44650-201ENSMUST00000206929 194 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 CT009696.1-201ENSMUST00000215745 256 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Mir202-201ENSMUST00000083568 72 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Hoxd3P09027 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.28□□□□□ -1.88
Hoxd3P09027 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.89
Hoxd3P09027 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Hoxd3P09027 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
Hoxd3P09027 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Hoxd3P09027 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm24544-201ENSMUST00000103862 110 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Snord100-201ENSMUST00000116836 74 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm22193-201ENSMUST00000116868 76 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm22031-201ENSMUST00000116945 126 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm25544-201ENSMUST00000122676 120 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm25965-201ENSMUST00000157170 93 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm22790-201ENSMUST00000157229 129 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm24246-201ENSMUST00000157315 132 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm25059-201ENSMUST00000157367 117 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm25910-201ENSMUST00000157620 140 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm22859-201ENSMUST00000174978 122 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm27792-201ENSMUST00000184031 115 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm29097-201ENSMUST00000190273 422 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm28169-201ENSMUST00000190342 345 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.27□□□□□ -1.89
Hoxd3P09027 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm43441-201ENSMUST00000201458 205 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 CT571266.1-201ENSMUST00000222859 153 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm10025-201ENSMUST00000079568 372 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 mt-Tv-201ENSMUST00000082389 69 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Gm25589-201ENSMUST00000082502 166 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.27□□□□□ -1.89
Hoxd3P09027 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Hoxd3P09027 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Hoxd3P09027 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.27□□□□□ -1.89
Hoxd3P09027 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Hoxd3P09027 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Hoxd3P09027 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Hoxd3P09027 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hoxd3P09027 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm44489-201ENSMUST00000104619 97 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Mir105-201ENSMUST00000104655 80 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm12513-201ENSMUST00000118617 352 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm24908-201ENSMUST00000157294 127 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm24718-201ENSMUST00000157521 136 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm22382-201ENSMUST00000158185 130 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm22156-201ENSMUST00000158409 141 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm22840-201ENSMUST00000158444 136 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm25447-201ENSMUST00000158997 128 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm8790-201ENSMUST00000194108 322 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm43381-201ENSMUST00000198553 165 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm23510-201ENSMUST00000083083 163 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Mir504-201ENSMUST00000093602 79 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
Hoxd3P09027 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Hoxd3P09027 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Hoxd3P09027 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Hoxd3P09027 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.26□□□□□ -1.89
Hoxd3P09027 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hoxd3P09027 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Hoxd3P09027 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.25□□□□□ -1.89
Hoxd3P09027 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Mir551b-201ENSMUST00000102165 98 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm22269-201ENSMUST00000104002 130 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm26421-201ENSMUST00000104279 132 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm22488-201ENSMUST00000116811 127 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm11982-201ENSMUST00000121480 314 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm12013-201ENSMUST00000121971 155 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm26036-201ENSMUST00000158149 144 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm24277-201ENSMUST00000158661 104 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm44354-201ENSMUST00000196017 143 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC3.25□□□□□ -1.89
Hoxd3P09027 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Gm25681-201ENSMUST00000083938 106 ntBASIC3.25□□□□□ -1.89
Hoxd3P09027 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Hoxd3P09027 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms