Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm23453-201ENSMUST00000083326 106 ntBASIC1.05□□□□□ -2.24
CopeO89079 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CopeO89079 Gm26080-201ENSMUST00000104069 131 ntBASIC1.04□□□□□ -2.24
CopeO89079 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.04□□□□□ -2.24
CopeO89079 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.04□□□□□ -2.24
CopeO89079 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.04□□□□□ -2.24
CopeO89079 Gm25269-201ENSMUST00000122601 104 ntBASIC1.04□□□□□ -2.24
CopeO89079 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CopeO89079 Gm24915-201ENSMUST00000157288 78 ntBASIC1.04□□□□□ -2.24
CopeO89079 Gm24777-201ENSMUST00000157644 107 ntBASIC1.04□□□□□ -2.24
CopeO89079 Gm26029-201ENSMUST00000158659 132 ntBASIC1.04□□□□□ -2.24
CopeO89079 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.04□□□□□ -2.24
CopeO89079 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.04□□□□□ -2.24
CopeO89079 Gm43245-201ENSMUST00000197603 468 ntBASIC1.04□□□□□ -2.24
CopeO89079 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.04□□□□□ -2.24
CopeO89079 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.04□□□□□ -2.24
CopeO89079 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.04□□□□□ -2.24
CopeO89079 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CopeO89079 Snord96a-201ENSMUST00000082791 81 ntBASIC1.04□□□□□ -2.24
CopeO89079 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.04□□□□□ -2.24
CopeO89079 Mir22-201ENSMUST00000083595 95 ntBASIC1.04□□□□□ -2.24
CopeO89079 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
CopeO89079 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
CopeO89079 Gm12779-201ENSMUST00000121496 143 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm15077-201ENSMUST00000122344 362 ntBASIC1.03□□□□□ -2.24
CopeO89079 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm8121-201ENSMUST00000153583 499 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm22143-201ENSMUST00000157401 203 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm22817-201ENSMUST00000157448 356 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm23317-201ENSMUST00000157999 129 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm25371-201ENSMUST00000158162 101 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm26405-201ENSMUST00000158495 100 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm23619-201ENSMUST00000178411 94 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm25474-201ENSMUST00000179052 94 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm22047-201ENSMUST00000179176 94 ntBASIC1.03□□□□□ -2.24
CopeO89079 Mir7091-201ENSMUST00000184075 79 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm9156-201ENSMUST00000189660 463 ntBASIC1.03□□□□□ -2.24
CopeO89079 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CopeO89079 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.03□□□□□ -2.24
CopeO89079 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.03□□□□□ -2.24
CopeO89079 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.03□□□□□ -2.24
CopeO89079 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.03□□□□□ -2.24
CopeO89079 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm45366-201ENSMUST00000209828 384 ntBASIC1.03□□□□□ -2.24
CopeO89079 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.03□□□□□ -2.24
CopeO89079 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.03□□□□□ -2.24
CopeO89079 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.03□□□□□ -2.24
CopeO89079 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.03□□□□□ -2.24
CopeO89079 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
CopeO89079 Mir340-201ENSMUST00000083483 98 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.03□□□□□ -2.24
CopeO89079 Gm15659-201ENSMUST00000118881 341 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm24366-201ENSMUST00000175383 86 ntBASIC1.02□□□□□ -2.25
CopeO89079 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm22129-201ENSMUST00000179034 107 ntBASIC1.02□□□□□ -2.25
CopeO89079 Mir6380-201ENSMUST00000184334 81 ntBASIC1.02□□□□□ -2.25
CopeO89079 Mir7062-201ENSMUST00000185038 66 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm28560-201ENSMUST00000186091 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm28334-201ENSMUST00000186653 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm28495-201ENSMUST00000188452 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm28232-201ENSMUST00000188683 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm28481-201ENSMUST00000189231 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm29059-201ENSMUST00000191534 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm37765-201ENSMUST00000192395 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm37237-201ENSMUST00000192893 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm36968-201ENSMUST00000193737 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm38290-201ENSMUST00000195238 315 ntBASIC1.02□□□□□ -2.25
CopeO89079 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm43739-201ENSMUST00000198294 307 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm43199-201ENSMUST00000200019 307 ntBASIC1.02□□□□□ -2.25
CopeO89079 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm22577-201ENSMUST00000083731 109 ntBASIC1.02□□□□□ -2.25
CopeO89079 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
CopeO89079 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CopeO89079 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.01□□□□□ -2.25
CopeO89079 Gm22164-201ENSMUST00000158413 106 ntBASIC1.01□□□□□ -2.25
CopeO89079 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.01□□□□□ -2.25
CopeO89079 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC1.01□□□□□ -2.25
CopeO89079 Mir3098-201ENSMUST00000175416 87 ntBASIC1.01□□□□□ -2.25
CopeO89079 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.01□□□□□ -2.25
CopeO89079 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CopeO89079 Gm42570-201ENSMUST00000195937 292 ntBASIC1.01□□□□□ -2.25
CopeO89079 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CopeO89079 Snora34-201ENSMUST00000083402 138 ntBASIC1.01□□□□□ -2.25
CopeO89079 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CopeO89079 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1□□□□□ -2.25
CopeO89079 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1□□□□□ -2.25
CopeO89079 Mir544-201ENSMUST00000103813 78 ntBASIC1□□□□□ -2.25
CopeO89079 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1□□□□□ -2.25
CopeO89079 Gm15214-201ENSMUST00000122155 470 ntBASIC1□□□□□ -2.25
CopeO89079 Gm25956-201ENSMUST00000175115 217 ntBASIC1□□□□□ -2.25
CopeO89079 Gm18396-201ENSMUST00000177095 361 ntBASIC1□□□□□ -2.25
CopeO89079 Gm37946-201ENSMUST00000192064 347 ntBASIC1□□□□□ -2.25
CopeO89079 Gm34139-201ENSMUST00000196166 294 ntBASIC1□□□□□ -2.25
CopeO89079 AC139186.1-201ENSMUST00000197610 94 ntBASIC1□□□□□ -2.25
CopeO89079 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1□□□□□ -2.25
CopeO89079 Snord118-201ENSMUST00000082965 135 ntBASIC1□□□□□ -2.25
CopeO89079 Gm37061-201ENSMUST00000195066 3243 ntBASIC1□□□□□ -2.25
CopeO89079 Gm22780-201ENSMUST00000104084 132 ntBASIC0.99□□□□□ -2.25
CopeO89079 Gm15162-201ENSMUST00000119325 283 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms