Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC153506.2-201ENSMUST00000218051 257 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.4□□□□□ -2.18
Col5a1O88207 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
Col5a1O88207 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
Col5a1O88207 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Col5a1O88207 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
Col5a1O88207 Gm25787-201ENSMUST00000104709 92 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Gm14355-201ENSMUST00000117352 264 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Gm12191-201ENSMUST00000118307 348 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Gm11784-201ENSMUST00000118568 474 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Gm9703-201ENSMUST00000119573 343 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.4□□□□□ -2.19
Col5a1O88207 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.4□□□□□ -2.19
Col5a1O88207 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Mir6338-201ENSMUST00000183389 109 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Mir6351-201ENSMUST00000183826 99 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Mir6951-201ENSMUST00000183910 75 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Gm7329-201ENSMUST00000185915 210 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Gm45273-201ENSMUST00000211559 281 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Col5a1O88207 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Gm25801-201ENSMUST00000082638 106 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Mir10b-201ENSMUST00000083566 68 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Olfr575-201ENSMUST00000084812 957 ntBASIC1.4□□□□□ -2.19
Col5a1O88207 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Col5a1O88207 Gm7164-201ENSMUST00000117503 450 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm14940-201ENSMUST00000119309 495 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm15379-201ENSMUST00000121224 648 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.39□□□□□ -2.19
Col5a1O88207 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.39□□□□□ -2.19
Col5a1O88207 Gm22386-201ENSMUST00000158192 129 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm23024-201ENSMUST00000158770 292 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm3027-201ENSMUST00000167579 451 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm8207-201ENSMUST00000171204 502 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm23862-201ENSMUST00000180342 94 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm27640-201ENSMUST00000184580 147 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm6060-201ENSMUST00000188671 251 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm29192-201ENSMUST00000190942 377 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Mir691-201ENSMUST00000199719 78 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Col5a1O88207 Gm45730-201ENSMUST00000212560 395 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm24948-201ENSMUST00000082866 207 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm24406-201ENSMUST00000083026 128 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm26126-201ENSMUST00000083188 164 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm26111-201ENSMUST00000083969 106 ntBASIC1.39□□□□□ -2.19
Col5a1O88207 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Col5a1O88207 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.39□□□□□ -2.19
Col5a1O88207 Gm26147-201ENSMUST00000104479 114 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Snord98-201ENSMUST00000116819 65 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.38□□□□□ -2.19
Col5a1O88207 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.38□□□□□ -2.19
Col5a1O88207 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.38□□□□□ -2.19
Col5a1O88207 Gm24192-201ENSMUST00000157978 145 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm25161-201ENSMUST00000158913 132 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Col5a1O88207 Gm23636-201ENSMUST00000175070 95 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm24810-201ENSMUST00000175317 70 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm26701-201ENSMUST00000181571 234 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.38□□□□□ -2.19
Col5a1O88207 Gm43723-201ENSMUST00000196886 189 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.38□□□□□ -2.19
Col5a1O88207 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Col5a1O88207 Gm44336-201ENSMUST00000203696 468 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm7240-201ENSMUST00000220769 664 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.38□□□□□ -2.19
Col5a1O88207 Gm23627-201ENSMUST00000082459 107 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm22502-201ENSMUST00000082488 107 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm22977-201ENSMUST00000082615 107 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm24149-201ENSMUST00000082757 107 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm12255-201ENSMUST00000117184 284 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm15167-201ENSMUST00000121997 187 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm24677-201ENSMUST00000158755 150 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Col5a1O88207 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Col5a1O88207 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm24085-201ENSMUST00000175172 116 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm22565-201ENSMUST00000175540 69 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm28579-201ENSMUST00000186143 369 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm28169-201ENSMUST00000190342 345 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm44468-201ENSMUST00000199516 105 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm19326-201ENSMUST00000219818 326 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.38□□□□□ -2.19
Col5a1O88207 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Col5a1O88207 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Col5a1O88207 Gm22780-201ENSMUST00000104084 132 ntBASIC1.37□□□□□ -2.19
Col5a1O88207 Gm11556-201ENSMUST00000120751 288 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms