Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm14287-201ENSMUST00000121060 117 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm14848-201ENSMUST00000121850 467 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.53□□□□□ -2.16
Tnfsf11O35235 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm24480-201ENSMUST00000157442 103 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm24419-201ENSMUST00000157875 332 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm26214-201ENSMUST00000158581 107 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Tnfsf11O35235 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm23860-201ENSMUST00000179446 132 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Mir6379-201ENSMUST00000183392 115 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Tnfsf11O35235 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm27979-201ENSMUST00000185126 56 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm28058-201ENSMUST00000186421 264 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm3867-201ENSMUST00000086108 279 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm25207-201ENSMUST00000093745 107 ntBASIC1.53□□□□□ -2.16
Tnfsf11O35235 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Tnfsf11O35235 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.52□□□□□ -2.17
Tnfsf11O35235 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
Tnfsf11O35235 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm22656-201ENSMUST00000104199 171 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 U6.1-201ENSMUST00000157443 101 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm24010-201ENSMUST00000157731 282 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm22727-201ENSMUST00000158090 116 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm22500-201ENSMUST00000158982 99 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm24085-201ENSMUST00000175172 116 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm21885-201ENSMUST00000178891 327 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Tnfsf11O35235 Mir6399-201ENSMUST00000184050 84 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm37128-201ENSMUST00000192599 232 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm44337-201ENSMUST00000196553 114 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm44482-201ENSMUST00000199232 103 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.52□□□□□ -2.17
Tnfsf11O35235 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm25589-201ENSMUST00000082502 166 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm24037-201ENSMUST00000082871 180 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.52□□□□□ -2.17
Tnfsf11O35235 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.52□□□□□ -2.17
Tnfsf11O35235 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Tnfsf11O35235 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm26015-201ENSMUST00000104402 125 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm11598-201ENSMUST00000119257 357 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm13475-201ENSMUST00000119290 234 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm25059-201ENSMUST00000157367 117 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm22316-201ENSMUST00000158012 216 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm22159-201ENSMUST00000158412 130 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm7592-201ENSMUST00000160674 627 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm9830-201ENSMUST00000178509 357 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
Tnfsf11O35235 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm19694-201ENSMUST00000192364 505 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm37054-201ENSMUST00000193481 543 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm43583-201ENSMUST00000199235 303 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm43587-201ENSMUST00000199590 204 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Mir497-201ENSMUST00000200557 84 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm44429-201ENSMUST00000203542 186 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Mir107-201ENSMUST00000083660 87 ntBASIC1.51□□□□□ -2.17
Tnfsf11O35235 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Tnfsf11O35235 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Tnfsf11O35235 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm12793-201ENSMUST00000119268 292 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm15067-201ENSMUST00000119534 156 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm15986-201ENSMUST00000122153 400 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm24896-201ENSMUST00000122741 135 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm24498-201ENSMUST00000158445 102 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm37337-201ENSMUST00000192601 993 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Snord43-201ENSMUST00000199549 108 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm43367-201ENSMUST00000199986 625 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm45403-201ENSMUST00000209453 276 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.5□□□□□ -2.17
Tnfsf11O35235 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm45815-201ENSMUST00000220241 146 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Tnfsf11O35235 Snora33-201ENSMUST00000093556 129 ntBASIC1.5□□□□□ -2.17
Tnfsf11O35235 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Tnfsf11O35235 Gm22713-201ENSMUST00000116895 130 ntBASIC1.49□□□□□ -2.17
Tnfsf11O35235 Gm12926-201ENSMUST00000121158 409 ntBASIC1.49□□□□□ -2.17
Tnfsf11O35235 Gm14709-201ENSMUST00000121225 304 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 147.1 ms