Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm23988-201ENSMUST00000117034 122 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm11285-201ENSMUST00000118443 322 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm12213-201ENSMUST00000119924 353 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm12617-201ENSMUST00000121268 381 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm24726-201ENSMUST00000158232 121 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm16326-201ENSMUST00000162843 414 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Shisa8J3QNX5 Snord53-201ENSMUST00000175146 78 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Snord93-201ENSMUST00000175580 71 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm7958-201ENSMUST00000178255 468 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm26297-201ENSMUST00000179464 132 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm7950-201ENSMUST00000179633 468 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm27869-201ENSMUST00000184327 122 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Mir6371-201ENSMUST00000184470 111 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm42739-201ENSMUST00000200687 226 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm45907-201ENSMUST00000213023 193 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm22744-201ENSMUST00000083444 65 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Gm25896-201ENSMUST00000083713 136 ntBASIC2.58□□□□□ -2
Shisa8J3QNX5 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Shisa8J3QNX5 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm23841-201ENSMUST00000116951 114 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm12042-201ENSMUST00000120479 301 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm14922-201ENSMUST00000121131 163 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm14846-201ENSMUST00000121868 216 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm23559-201ENSMUST00000157824 103 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm26287-201ENSMUST00000158887 81 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm17100-201ENSMUST00000168963 272 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm20672-201ENSMUST00000176605 261 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm22911-201ENSMUST00000177920 107 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm22450-201ENSMUST00000179641 107 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm25473-201ENSMUST00000180191 107 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Mir6370-201ENSMUST00000183510 120 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm28825-201ENSMUST00000186233 238 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm29104-201ENSMUST00000186304 222 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm37085-201ENSMUST00000193780 196 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm37089-201ENSMUST00000195616 129 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm18341-201ENSMUST00000197538 622 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm44223-201ENSMUST00000204854 114 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.57□□□□□ -2
Shisa8J3QNX5 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm24856-201ENSMUST00000082809 107 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm23297-201ENSMUST00000083184 127 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm26071-201ENSMUST00000083261 107 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm24521-201ENSMUST00000083958 107 ntBASIC2.57□□□□□ -2
Shisa8J3QNX5 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Shisa8J3QNX5 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Shisa8J3QNX5 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Shisa8J3QNX5 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm22779-201ENSMUST00000104085 107 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm13992-201ENSMUST00000120558 156 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm25805-201ENSMUST00000122788 108 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm25392-201ENSMUST00000157335 297 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm24475-201ENSMUST00000157435 143 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm28020-201ENSMUST00000157739 67 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm22187-201ENSMUST00000157819 129 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm19257-201ENSMUST00000186121 183 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm37763-201ENSMUST00000193445 120 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Shisa8J3QNX5 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm6030-201ENSMUST00000078768 402 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Shisa8J3QNX5 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Shisa8J3QNX5 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.56□□□□□ -2
Shisa8J3QNX5 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.55□□□□□ -2
Shisa8J3QNX5 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Shisa8J3QNX5 Mir872-201ENSMUST00000104728 81 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm13541-201ENSMUST00000119519 283 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm12443-201ENSMUST00000122308 323 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm25269-201ENSMUST00000122601 104 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm14389-201ENSMUST00000140453 241 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Trav20-201ENSMUST00000142754 347 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm26279-201ENSMUST00000157095 102 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm24716-201ENSMUST00000157524 104 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm25454-201ENSMUST00000157947 315 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm25066-201ENSMUST00000158145 123 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Gm22521-201ENSMUST00000158272 134 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Shisa8J3QNX5 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.55□□□□□ -2
Shisa8J3QNX5 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 133.2 ms