Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Trbv6-201ENSMUST00000193743 276 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm37404-201ENSMUST00000195726 359 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm44063-201ENSMUST00000203307 376 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm44161-201ENSMUST00000203532 253 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm44960-201ENSMUST00000207403 141 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm22062-201ENSMUST00000082563 107 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Mir759-201ENSMUST00000103254 98 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm14774-201ENSMUST00000117857 536 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm13432-201ENSMUST00000118861 241 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm7209-201ENSMUST00000122339 333 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm25543-201ENSMUST00000122678 312 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm23381-201ENSMUST00000157676 94 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm22483-201ENSMUST00000157986 274 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm22534-201ENSMUST00000158173 104 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm16038-201ENSMUST00000159317 193 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm22800-201ENSMUST00000175627 94 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Mir6916-201ENSMUST00000184514 63 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm28627-201ENSMUST00000186141 453 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Gm37338-201ENSMUST00000191986 127 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.14□□□□□ -2.07
Trav13d-3J3QMG8 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Mdga2-203ENSMUST00000113942 423 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm13885-201ENSMUST00000117569 187 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm11859-201ENSMUST00000118099 455 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm14821-201ENSMUST00000121975 435 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm16355-201ENSMUST00000128606 231 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm23980-201ENSMUST00000157135 158 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm24210-201ENSMUST00000158263 133 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm22434-201ENSMUST00000158549 122 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm23921-201ENSMUST00000175258 107 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm24487-201ENSMUST00000178017 63 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm24799-201ENSMUST00000178431 79 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Mir6386-201ENSMUST00000183558 104 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Mir6993-201ENSMUST00000184912 65 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm43626-201ENSMUST00000198575 162 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm44182-201ENSMUST00000204052 115 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Gm44654-201ENSMUST00000208052 329 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Mir496a-201ENSMUST00000093627 79 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Trav13d-3J3QMG8 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm23142-201ENSMUST00000101848 105 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm26240-201ENSMUST00000101893 105 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm22752-201ENSMUST00000102083 109 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm24280-201ENSMUST00000104237 134 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm15365-201ENSMUST00000122392 300 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm25808-201ENSMUST00000122784 284 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm22535-201ENSMUST00000158174 119 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm23262-201ENSMUST00000158323 168 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm24771-201ENSMUST00000158508 137 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm7592-201ENSMUST00000160674 627 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Mir3076-201ENSMUST00000175415 60 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm28169-201ENSMUST00000190342 345 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm44555-201ENSMUST00000209008 148 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm23731-201ENSMUST00000083749 107 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav13d-3J3QMG8 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Mir344c-201ENSMUST00000103919 92 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm22713-201ENSMUST00000116895 130 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Mir669i-201ENSMUST00000117007 127 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm13756-201ENSMUST00000117618 222 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm11935-201ENSMUST00000118608 399 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm22447-201ENSMUST00000158155 92 ntBASIC2.11□□□□□ -2.07
Trav13d-3J3QMG8 Gm25711-201ENSMUST00000158633 128 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms