Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm23740-201ENSMUST00000157385 100 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Mir1969-201ENSMUST00000157623 94 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm23339-201ENSMUST00000158962 139 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm17511-201ENSMUST00000172206 342 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm25993-201ENSMUST00000175391 80 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm27265-201ENSMUST00000183559 77 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Mir6539-201ENSMUST00000183732 110 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Mir7014-201ENSMUST00000183853 63 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Mir7651-201ENSMUST00000184154 64 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Mir6410-201ENSMUST00000184204 104 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm27944-201ENSMUST00000185155 103 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm37689-201ENSMUST00000193139 275 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm36956-201ENSMUST00000193830 214 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Mir409-201ENSMUST00000198153 79 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm6051-201ENSMUST00000201529 352 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm42961-201ENSMUST00000202023 181 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 AC154527.1-201ENSMUST00000225809 242 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm25296-201ENSMUST00000082566 67 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm24706-201ENSMUST00000082806 137 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm22741-201ENSMUST00000083438 165 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Mir129-1-201ENSMUST00000083535 73 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Sec24c-202ENSMUST00000223751 4196 ntBASIC0.75□□□□□ -2.29
Gm4559A4IF42 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Il6st-203ENSMUST00000183663 8678 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Gm4559A4IF42 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Adgrl3-219ENSMUST00000122356 4853 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
Gm4559A4IF42 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms