Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm35736-201ENSMUST00000203681 313 ntBASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm25131-201ENSMUST00000082653 151 ntBASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Snord1a-201ENSMUST00000083160 74 ntBASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm22577-201ENSMUST00000083731 109 ntBASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Trav12d-3A0A075B6A4 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Mir374b-201ENSMUST00000102314 95 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm23950-201ENSMUST00000104026 129 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm22785-201ENSMUST00000104087 132 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm23015-201ENSMUST00000104145 128 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm13588-201ENSMUST00000120026 135 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm7916-201ENSMUST00000120325 456 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm22221-201ENSMUST00000157362 103 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm23277-201ENSMUST00000157914 136 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm23893-201ENSMUST00000158106 134 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Rnu7-201ENSMUST00000158458 62 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm26029-201ENSMUST00000158659 132 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm7925-201ENSMUST00000166690 401 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm3111-201ENSMUST00000167426 490 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm24306-201ENSMUST00000180229 79 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Mir7017-201ENSMUST00000184894 62 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm37579-201ENSMUST00000194291 142 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm42570-201ENSMUST00000195937 292 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm43035-201ENSMUST00000197626 517 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm45878-201ENSMUST00000211839 241 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm25128-201ENSMUST00000083339 76 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.61□□□□□ -2.31
Trav12d-3A0A075B6A4 Mir301b-201ENSMUST00000102333 97 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm24588-201ENSMUST00000116696 83 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm14923-201ENSMUST00000118270 155 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm23120-201ENSMUST00000157654 287 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm25706-201ENSMUST00000157828 247 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm23083-201ENSMUST00000157851 116 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm24808-201ENSMUST00000157993 118 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm24902-201ENSMUST00000158126 123 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm26271-201ENSMUST00000158349 104 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm20386-201ENSMUST00000174010 132 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm25956-201ENSMUST00000175115 217 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm24390-201ENSMUST00000179578 62 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Mir7068-201ENSMUST00000183439 74 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm28956-201ENSMUST00000189047 427 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm44491-201ENSMUST00000196794 96 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm44429-201ENSMUST00000203542 186 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm45296-201ENSMUST00000209625 205 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Snora34-201ENSMUST00000083402 138 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Snord7-201ENSMUST00000083781 97 ntBASIC0.6□□□□□ -2.31
Trav12d-3A0A075B6A4 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm26074-201ENSMUST00000104063 129 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Mir1193-201ENSMUST00000116761 121 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm22193-201ENSMUST00000116868 76 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm22713-201ENSMUST00000116895 130 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm25784-201ENSMUST00000122524 81 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm22236-201ENSMUST00000157093 106 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm25371-201ENSMUST00000158162 101 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm27587-201ENSMUST00000185116 163 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm42164-201ENSMUST00000198881 379 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 AC154506.3-201ENSMUST00000225417 213 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm24615-201ENSMUST00000083268 113 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Snord35a-201ENSMUST00000083884 90 ntBASIC0.59□□□□□ -2.31
Trav12d-3A0A075B6A4 Gm24282-201ENSMUST00000104232 66 ntBASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Gm23336-201ENSMUST00000117023 123 ntBASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Gm22136-201ENSMUST00000158751 268 ntBASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Gm25707-201ENSMUST00000175120 96 ntBASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Gm20689-201ENSMUST00000176033 279 ntBASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Gm22263-201ENSMUST00000180060 104 ntBASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.58□□□□□ -2.32
Trav12d-3A0A075B6A4 Gm28110-201ENSMUST00000185782 315 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms