Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm18658-201ENSMUST00000195558 270 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm33654-201ENSMUST00000221704 215 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm21937-201ENSMUST00000222825 218 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm22978-201ENSMUST00000082607 160 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Mir344c-201ENSMUST00000103919 92 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm25543-201ENSMUST00000122678 312 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm15692-201ENSMUST00000152173 352 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm25970-201ENSMUST00000157165 86 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm24691-201ENSMUST00000157762 140 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm25066-201ENSMUST00000158145 123 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm16038-201ENSMUST00000159317 193 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm9892-201ENSMUST00000182415 992 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm26056-201ENSMUST00000083043 104 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm24412-201ENSMUST00000083426 109 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.96□□□□□ -2.1
Trav5-4A0A075B652 Gm13439-201ENSMUST00000117541 409 ntBASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 Gm13756-201ENSMUST00000117618 222 ntBASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 Gm24598-201ENSMUST00000122510 74 ntBASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 Gm20660-201ENSMUST00000177515 289 ntBASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 Gm23860-201ENSMUST00000179446 132 ntBASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 Gm28848-201ENSMUST00000189984 168 ntBASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Trav5-4A0A075B652 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Gm26249-201ENSMUST00000116708 118 ntBASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Gm12926-201ENSMUST00000121158 409 ntBASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Gm15281-201ENSMUST00000125181 351 ntBASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Gm23642-201ENSMUST00000157858 258 ntBASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Mir7093-201ENSMUST00000184195 101 ntBASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Snord43-201ENSMUST00000199549 108 ntBASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Mir301-201ENSMUST00000083655 86 ntBASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Gm23731-201ENSMUST00000083749 107 ntBASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Gm25628-201ENSMUST00000084002 105 ntBASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.94□□□□□ -2.1
Trav5-4A0A075B652 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm22752-201ENSMUST00000102083 109 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm25407-201ENSMUST00000104102 134 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm23391-201ENSMUST00000157579 104 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm23120-201ENSMUST00000157654 287 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm25866-201ENSMUST00000158245 112 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm23858-201ENSMUST00000158384 106 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm25658-201ENSMUST00000158472 128 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm27722-201ENSMUST00000183908 76 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Mir6346-201ENSMUST00000183982 81 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm29397-201ENSMUST00000185205 333 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm18357-201ENSMUST00000188184 580 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm38050-201ENSMUST00000191904 238 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm44149-201ENSMUST00000204256 226 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm7495-201ENSMUST00000215099 426 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Snord68-201ENSMUST00000082516 86 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm25402-201ENSMUST00000082966 131 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm26494-201ENSMUST00000083154 143 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Mir107-201ENSMUST00000083660 87 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm24493-201ENSMUST00000083805 143 ntBASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
Trav5-4A0A075B652 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm15844-201ENSMUST00000118016 576 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm14652-201ENSMUST00000118479 235 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm13396-201ENSMUST00000120617 271 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm22791-201ENSMUST00000157232 145 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm25909-201ENSMUST00000157619 121 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm22338-201ENSMUST00000157715 129 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm24853-201ENSMUST00000158026 121 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm22731-201ENSMUST00000158086 94 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm22517-201ENSMUST00000158265 136 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm24922-201ENSMUST00000158511 102 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm23005-201ENSMUST00000158950 136 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm7953-201ENSMUST00000168278 469 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm24333-201ENSMUST00000175101 84 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm25994-201ENSMUST00000175392 101 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Mir3076-201ENSMUST00000175415 60 ntBASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trav5-4A0A075B652 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms