Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 Gm28912-201ENSMUST00000189001 234 ntBASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 Gm28337-201ENSMUST00000190425 666 ntBASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 Gm37923-201ENSMUST00000191624 161 ntBASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 Gm31123-201ENSMUST00000192094 666 ntBASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 Snora41-201ENSMUST00000082668 132 ntBASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 Gm22508-201ENSMUST00000082772 110 ntBASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 Gm24045-201ENSMUST00000083113 98 ntBASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.69□□□□□ -2.3
Trav6-6A0A075B603 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm22689-201ENSMUST00000102452 110 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm24340-201ENSMUST00000104208 97 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm14765-201ENSMUST00000121954 326 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm24632-201ENSMUST00000122770 323 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm23317-201ENSMUST00000157999 129 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm26038-201ENSMUST00000158151 106 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm26405-201ENSMUST00000158495 100 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm17164-201ENSMUST00000169013 506 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm23636-201ENSMUST00000175070 95 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm23862-201ENSMUST00000180342 94 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm28439-201ENSMUST00000187714 876 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm9156-201ENSMUST00000189660 463 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm18854-201ENSMUST00000211196 329 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm6369-201ENSMUST00000069626 412 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Gm25038-201ENSMUST00000082928 130 ntBASIC0.68□□□□□ -2.3
Trav6-6A0A075B603 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm24431-201ENSMUST00000104073 66 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm13992-201ENSMUST00000120558 156 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm26150-201ENSMUST00000157426 151 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm25162-201ENSMUST00000158906 159 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm28409-201ENSMUST00000187064 103 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm38323-201ENSMUST00000192450 210 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm25079-201ENSMUST00000082529 203 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Snord118-201ENSMUST00000082965 135 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm23503-201ENSMUST00000083903 107 ntBASIC0.67□□□□□ -2.3
Trav6-6A0A075B603 Gm13356-201ENSMUST00000121678 335 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm24481-201ENSMUST00000157210 102 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm22597-201ENSMUST00000157602 80 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm25371-201ENSMUST00000158162 101 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm25768-201ENSMUST00000158570 98 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm23819-201ENSMUST00000158744 109 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm3111-201ENSMUST00000167426 490 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm43035-201ENSMUST00000197626 517 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm23370-201ENSMUST00000199545 130 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm44301-201ENSMUST00000200362 143 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm18703-201ENSMUST00000215318 333 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm24977-201ENSMUST00000083106 163 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Mir340-201ENSMUST00000083483 98 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm24494-201ENSMUST00000083804 81 ntBASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trav6-6A0A075B603 Gm23011-201ENSMUST00000104148 132 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm22221-201ENSMUST00000157362 103 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm25706-201ENSMUST00000157828 247 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Rnu7-201ENSMUST00000158458 62 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm43245-201ENSMUST00000197603 468 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm42164-201ENSMUST00000198881 379 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm2628-201ENSMUST00000218019 426 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm25131-201ENSMUST00000082653 151 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm23299-201ENSMUST00000082708 79 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm24536-201ENSMUST00000083144 107 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Gm22972-201ENSMUST00000083297 131 ntBASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Trav6-6A0A075B603 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Trav6-6A0A075B603 Gm22785-201ENSMUST00000104087 132 ntBASIC0.64□□□□□ -2.31
Trav6-6A0A075B603 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.64□□□□□ -2.31
Trav6-6A0A075B603 Gm12449-201ENSMUST00000117572 234 ntBASIC0.64□□□□□ -2.31
Trav6-6A0A075B603 Gm7916-201ENSMUST00000120325 456 ntBASIC0.64□□□□□ -2.31
Trav6-6A0A075B603 Gm11891-201ENSMUST00000121241 619 ntBASIC0.64□□□□□ -2.31
Trav6-6A0A075B603 Gm25269-201ENSMUST00000122601 104 ntBASIC0.64□□□□□ -2.31
Trav6-6A0A075B603 Gm24668-201ENSMUST00000158935 104 ntBASIC0.64□□□□□ -2.31
Trav6-6A0A075B603 Gm7925-201ENSMUST00000166690 401 ntBASIC0.64□□□□□ -2.31
Trav6-6A0A075B603 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms