Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Nkx2-4Q9EQM3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Nkx2-4Q9EQM3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Nkx2-4Q9EQM3 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm23951-201ENSMUST00000104029 132 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm24671-201ENSMUST00000104159 158 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm13725-201ENSMUST00000122139 207 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm12956-201ENSMUST00000122184 414 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm24210-201ENSMUST00000158263 133 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm23759-201ENSMUST00000158351 268 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Mir6402-201ENSMUST00000183406 80 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm44055-201ENSMUST00000204376 247 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm45005-201ENSMUST00000206640 157 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm45313-201ENSMUST00000210584 178 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm23055-201ENSMUST00000082805 94 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Gm26327-201ENSMUST00000093724 111 ntBASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm24670-201ENSMUST00000104154 132 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm15272-201ENSMUST00000120865 233 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm23889-201ENSMUST00000122689 104 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm22264-201ENSMUST00000178200 107 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm28257-201ENSMUST00000185244 463 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm28825-201ENSMUST00000186233 238 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm29147-201ENSMUST00000186846 315 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm5329-201ENSMUST00000186898 463 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm29227-201ENSMUST00000187139 315 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm29034-201ENSMUST00000188099 315 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm28160-201ENSMUST00000191229 315 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm37129-201ENSMUST00000195791 315 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm45687-201ENSMUST00000209454 155 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm19563-201ENSMUST00000222031 270 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm23625-201ENSMUST00000082457 100 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.82□□□□□ -1.96
Nkx2-4Q9EQM3 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Gm26341-201ENSMUST00000104561 134 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Gm23803-201ENSMUST00000104610 132 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Gm15183-201ENSMUST00000118933 348 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Gm14069-201ENSMUST00000120815 229 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Gm22389-201ENSMUST00000158193 301 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Snord93-201ENSMUST00000175580 71 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Gm27700-201ENSMUST00000185003 81 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Mir3569-201ENSMUST00000185080 58 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Gm43264-201ENSMUST00000202284 325 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Nkx2-4Q9EQM3 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm23766-201ENSMUST00000103894 80 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm15282-201ENSMUST00000117707 300 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm26256-201ENSMUST00000122499 186 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm23829-201ENSMUST00000157392 270 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm23921-201ENSMUST00000175258 107 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Mir6370-201ENSMUST00000183510 120 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm27399-201ENSMUST00000184250 78 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm27997-201ENSMUST00000184942 69 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm27369-201ENSMUST00000185182 71 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm37801-201ENSMUST00000194754 274 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm43286-201ENSMUST00000197420 424 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm43600-201ENSMUST00000202134 223 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Nkx2-4Q9EQM3 Gm22685-201ENSMUST00000082848 106 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms