Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm18296-201ENSMUST00000192475 783 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.54□□□□□ -2.16
Cdc40Q9DC48 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm43583-201ENSMUST00000199235 303 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm45366-201ENSMUST00000209828 384 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm25586-201ENSMUST00000082499 112 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm25853-201ENSMUST00000082793 132 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Mir148b-201ENSMUST00000083626 97 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm26175-201ENSMUST00000083794 131 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.54□□□□□ -2.16
Cdc40Q9DC48 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm12370-201ENSMUST00000117809 604 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm14362-201ENSMUST00000121679 273 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm15254-201ENSMUST00000149567 273 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm23983-201ENSMUST00000157142 114 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm22603-201ENSMUST00000157603 96 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm23181-201ENSMUST00000158685 110 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm23267-201ENSMUST00000178490 132 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm35558-203ENSMUST00000222264 204 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Cdc40Q9DC48 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Cdc40Q9DC48 Gm25414-201ENSMUST00000101814 107 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm11389-201ENSMUST00000121407 430 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm14766-201ENSMUST00000121689 367 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm25115-201ENSMUST00000157187 140 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm22316-201ENSMUST00000158012 216 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm16162-201ENSMUST00000162296 297 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm7925-201ENSMUST00000166690 401 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm18185-201ENSMUST00000186725 667 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm37054-201ENSMUST00000193481 543 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm25820-201ENSMUST00000198589 127 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm42960-201ENSMUST00000202160 241 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm44336-201ENSMUST00000203696 468 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm18854-201ENSMUST00000211196 329 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm24406-201ENSMUST00000083026 128 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm23453-201ENSMUST00000083326 106 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm22577-201ENSMUST00000083731 109 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.52□□□□□ -2.17
Cdc40Q9DC48 Gm25507-201ENSMUST00000116981 144 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Gm25163-201ENSMUST00000158905 104 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Gm23725-201ENSMUST00000177876 107 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Gm29073-201ENSMUST00000185563 664 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Gm29165-201ENSMUST00000190655 664 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Gm29211-201ENSMUST00000191470 664 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.51□□□□□ -2.17
Cdc40Q9DC48 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Gm24035-201ENSMUST00000082867 107 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Cdc40Q9DC48 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm26396-201ENSMUST00000104093 132 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm22771-201ENSMUST00000104449 91 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm14624-201ENSMUST00000117746 192 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm14678-201ENSMUST00000121396 482 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm11358-201ENSMUST00000122310 373 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm26393-201ENSMUST00000157625 129 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm24419-201ENSMUST00000157875 332 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm22768-201ENSMUST00000158366 153 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm25831-201ENSMUST00000158924 163 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm9830-201ENSMUST00000178509 357 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Gm9402-201ENSMUST00000196849 388 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.5□□□□□ -2.17
Cdc40Q9DC48 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdc40Q9DC48 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms