Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.16□□□□□ -2.06
Smc1aQ9CU62 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.16□□□□□ -2.06
Smc1aQ9CU62 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.16□□□□□ -2.06
Smc1aQ9CU62 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.16□□□□□ -2.06
Smc1aQ9CU62 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.16□□□□□ -2.06
Smc1aQ9CU62 Mir29c-201ENSMUST00000083614 88 ntBASIC2.16□□□□□ -2.06
Smc1aQ9CU62 Mir107-201ENSMUST00000083660 87 ntBASIC2.16□□□□□ -2.06
Smc1aQ9CU62 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Mir743b-201ENSMUST00000104751 77 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Gm11935-201ENSMUST00000118608 399 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Gm15067-201ENSMUST00000119534 156 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Gm24783-201ENSMUST00000157639 100 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Gm24862-201ENSMUST00000179103 79 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Gm23310-201ENSMUST00000179105 79 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Gm25461-201ENSMUST00000179293 79 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Gm27898-201ENSMUST00000183987 80 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 CT010505.1-201ENSMUST00000227026 396 ntBASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Smc1aQ9CU62 Gm22678-201ENSMUST00000116974 101 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm5396-201ENSMUST00000121222 532 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm15899-201ENSMUST00000128586 238 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm25625-201ENSMUST00000157221 96 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm23411-201ENSMUST00000157988 62 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm23342-201ENSMUST00000158958 115 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm19932-201ENSMUST00000177033 313 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm18588-201ENSMUST00000177308 492 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Mir7016-201ENSMUST00000184308 72 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Mir6950-201ENSMUST00000184438 73 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Gm42622-201ENSMUST00000197229 355 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Mir151-201ENSMUST00000083678 68 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Snora33-201ENSMUST00000093556 129 ntBASIC2.14□□□□□ -2.07
Smc1aQ9CU62 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm11786-201ENSMUST00000120799 155 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm16328-201ENSMUST00000126985 196 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm26278-201ENSMUST00000157098 132 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm24394-201ENSMUST00000158141 123 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm25994-201ENSMUST00000175392 101 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Mir28b-201ENSMUST00000175399 80 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm21885-201ENSMUST00000178891 327 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.13□□□□□ -2.07
Smc1aQ9CU62 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm25124-201ENSMUST00000083345 164 ntBASIC2.13□□□□□ -2.07
Smc1aQ9CU62 Gm14355-201ENSMUST00000117352 264 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Gm17161-201ENSMUST00000169187 524 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Gm24573-201ENSMUST00000175499 112 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Gm5900-201ENSMUST00000179862 375 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Mir6901-201ENSMUST00000185062 62 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Smc1aQ9CU62 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Gm22062-201ENSMUST00000082563 107 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Gm24151-201ENSMUST00000082758 141 ntBASIC2.12□□□□□ -2.07
Smc1aQ9CU62 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm22656-201ENSMUST00000104199 171 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm11386-201ENSMUST00000117761 347 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm12926-201ENSMUST00000121158 409 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm24211-201ENSMUST00000158264 107 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm24388-201ENSMUST00000177872 107 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm25314-201ENSMUST00000178810 79 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm27624-201ENSMUST00000185047 177 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm27544-201ENSMUST00000185069 155 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm28506-201ENSMUST00000189937 150 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm44128-201ENSMUST00000204909 219 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm44564-201ENSMUST00000207985 180 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 AC164297.5-201ENSMUST00000224365 198 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm26126-201ENSMUST00000083188 164 ntBASIC2.11□□□□□ -2.07
Smc1aQ9CU62 Gm13153-201ENSMUST00000120969 637 ntBASIC2.1□□□□□ -2.07
Smc1aQ9CU62 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.1□□□□□ -2.07
Smc1aQ9CU62 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Smc1aQ9CU62 Mir1949-201ENSMUST00000157434 141 ntBASIC2.1□□□□□ -2.07
Smc1aQ9CU62 U6.1-201ENSMUST00000157443 101 ntBASIC2.1□□□□□ -2.07
Smc1aQ9CU62 Gm23016-201ENSMUST00000158431 62 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms