Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Mir3086-201ENSMUST00000175072 87 ntBASIC2.13□□□□□ -2.07
Ccdc43Q9CR29 Gm26864-201ENSMUST00000181346 156 ntBASIC2.13□□□□□ -2.07
Ccdc43Q9CR29 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc43Q9CR29 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.13□□□□□ -2.07
Ccdc43Q9CR29 Gm24172-201ENSMUST00000104127 117 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Gm22494-201ENSMUST00000104495 128 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Gm14293-201ENSMUST00000118528 577 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Gm25059-201ENSMUST00000157367 117 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Gm22654-201ENSMUST00000157874 105 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Gm17161-201ENSMUST00000169187 524 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Gm27443-201ENSMUST00000184660 98 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc43Q9CR29 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm13720-201ENSMUST00000120741 196 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Trav20-201ENSMUST00000142754 347 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 U6.1-201ENSMUST00000157443 101 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm24419-201ENSMUST00000157875 332 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm24191-201ENSMUST00000157977 122 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm23411-201ENSMUST00000157988 62 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm26501-201ENSMUST00000178307 107 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm18696-201ENSMUST00000220103 274 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm25589-201ENSMUST00000082502 166 ntBASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc43Q9CR29 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm24338-201ENSMUST00000104205 127 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm22891-201ENSMUST00000158641 164 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Mir6341-201ENSMUST00000183490 121 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm27511-201ENSMUST00000183502 127 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm18357-201ENSMUST00000188184 580 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm44754-201ENSMUST00000208155 400 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm22299-201ENSMUST00000082663 136 ntBASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ccdc43Q9CR29 Gm25090-201ENSMUST00000104000 132 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm24598-201ENSMUST00000122510 74 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm24896-201ENSMUST00000122741 135 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm22985-201ENSMUST00000122754 116 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm16328-201ENSMUST00000126985 196 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm25054-201ENSMUST00000157370 97 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm22731-201ENSMUST00000158086 94 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm23813-201ENSMUST00000175153 77 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm27544-201ENSMUST00000185069 155 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm37119-201ENSMUST00000195691 389 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Mir3961-201ENSMUST00000198795 59 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm42960-201ENSMUST00000202160 241 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm25813-201ENSMUST00000082748 191 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Mir30d-201ENSMUST00000083503 82 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Gm25651-201ENSMUST00000083782 119 ntBASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ccdc43Q9CR29 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Ccdc43Q9CR29 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Ccdc43Q9CR29 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm13457-201ENSMUST00000117885 267 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm23172-201ENSMUST00000157160 124 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm24478-201ENSMUST00000157439 158 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm24770-201ENSMUST00000158505 92 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm20613-201ENSMUST00000175828 345 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm22264-201ENSMUST00000178200 107 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm21815-201ENSMUST00000178213 664 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm20874-201ENSMUST00000178356 663 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm26335-201ENSMUST00000178449 107 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Mir378a-201ENSMUST00000198300 66 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm5001-201ENSMUST00000204361 331 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm22997-201ENSMUST00000082845 107 ntBASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Ccdc43Q9CR29 Gm14355-201ENSMUST00000117352 264 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm15529-201ENSMUST00000121833 994 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm14364-201ENSMUST00000129209 267 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm25559-201ENSMUST00000157182 74 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm16584-201ENSMUST00000159267 189 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Mir5118-201ENSMUST00000175551 67 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms