Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm43680-201ENSMUST00000199466 340 ntBASIC3.14□□□□□ -1.91
Cldnd1Q9CQX5 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.14□□□□□ -1.91
Cldnd1Q9CQX5 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.14□□□□□ -1.91
Cldnd1Q9CQX5 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cldnd1Q9CQX5 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cldnd1Q9CQX5 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cldnd1Q9CQX5 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.14□□□□□ -1.91
Cldnd1Q9CQX5 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm22782-201ENSMUST00000104082 132 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm23705-201ENSMUST00000104370 130 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm12723-201ENSMUST00000120700 451 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm23901-201ENSMUST00000157570 107 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm8292-201ENSMUST00000162574 396 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm17166-201ENSMUST00000172006 431 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm27379-201ENSMUST00000183730 123 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm29262-201ENSMUST00000190084 196 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm42526-201ENSMUST00000198956 393 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm45687-201ENSMUST00000209454 155 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm45452-201ENSMUST00000210905 177 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Gm18015-201ENSMUST00000214879 316 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.13□□□□□ -1.91
Cldnd1Q9CQX5 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm23836-201ENSMUST00000104434 129 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm23911-201ENSMUST00000104596 134 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm14782-201ENSMUST00000120151 195 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm13992-201ENSMUST00000120558 156 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm12858-201ENSMUST00000121913 208 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm22984-201ENSMUST00000122751 122 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm24726-201ENSMUST00000158232 121 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm20542-201ENSMUST00000174582 372 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm7958-201ENSMUST00000178255 468 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm7950-201ENSMUST00000179633 468 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm37089-201ENSMUST00000195616 129 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm22443-201ENSMUST00000082890 107 ntBASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cldnd1Q9CQX5 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm24423-201ENSMUST00000101982 106 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Mir291a-201ENSMUST00000104815 82 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm14971-201ENSMUST00000117980 663 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm13432-201ENSMUST00000118861 241 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm14402-201ENSMUST00000122217 508 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm12443-201ENSMUST00000122308 323 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm22026-201ENSMUST00000122735 281 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm25153-201ENSMUST00000157118 156 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm22433-201ENSMUST00000158550 142 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm24056-201ENSMUST00000158617 146 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Mir3076-201ENSMUST00000175415 60 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm20660-201ENSMUST00000177515 289 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Mir376a-201ENSMUST00000197584 68 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm5358-201ENSMUST00000212814 353 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Gm22294-201ENSMUST00000083308 104 ntBASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Cldnd1Q9CQX5 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Mir872-201ENSMUST00000104728 81 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Gm14846-201ENSMUST00000121868 216 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Gm25269-201ENSMUST00000122601 104 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Gm22315-201ENSMUST00000158010 143 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Gm24930-201ENSMUST00000158315 83 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Gm4468-201ENSMUST00000170206 294 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Gm22118-201ENSMUST00000175593 171 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Gm22259-201ENSMUST00000178926 107 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Gm18486-201ENSMUST00000184040 298 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 Gm34314-201ENSMUST00000203622 367 ntBASIC3.1□□□□□ -1.91
Cldnd1Q9CQX5 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms