Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.42□□□□□ -1.86
Nkx6-1Q99MA9 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.42□□□□□ -1.86
Nkx6-1Q99MA9 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Nkx6-1Q99MA9 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Nkx6-1Q99MA9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Nkx6-1Q99MA9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Nkx6-1Q99MA9 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Nkx6-1Q99MA9 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
Nkx6-1Q99MA9 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Gm24067-201ENSMUST00000104514 85 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Gm24892-201ENSMUST00000122747 104 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Gm23536-201ENSMUST00000157541 134 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Gm22192-201ENSMUST00000175128 85 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Mir7667-201ENSMUST00000183866 63 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Mir3068-202ENSMUST00000197755 79 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Gm42526-201ENSMUST00000198956 393 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Gm25632-201ENSMUST00000083112 85 ntBASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nkx6-1Q99MA9 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Nkx6-1Q99MA9 Snord14c-201ENSMUST00000101927 86 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Gm24118-201ENSMUST00000103972 126 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Gm25915-201ENSMUST00000104265 126 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Gm23492-201ENSMUST00000116837 115 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Gm13831-201ENSMUST00000118764 302 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Gm23234-201ENSMUST00000157304 134 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Gm17020-201ENSMUST00000172274 274 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Gm44343-201ENSMUST00000196702 90 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Gm22978-201ENSMUST00000082607 160 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Snord15a-201ENSMUST00000083888 148 ntBASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Nkx6-1Q99MA9 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm9119-201ENSMUST00000118866 495 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm25599-201ENSMUST00000157816 103 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm24846-201ENSMUST00000158033 108 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm22890-201ENSMUST00000158642 144 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm4468-201ENSMUST00000170206 294 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Mir6399-201ENSMUST00000184050 84 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm44393-201ENSMUST00000197418 138 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm24355-201ENSMUST00000082858 122 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Gm23723-201ENSMUST00000082996 132 ntBASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Nkx6-1Q99MA9 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm14748-201ENSMUST00000119819 411 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm24908-201ENSMUST00000157294 127 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm25424-201ENSMUST00000157612 58 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm24053-201ENSMUST00000158620 105 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm23476-201ENSMUST00000158881 274 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm20058-201ENSMUST00000186939 284 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm25813-201ENSMUST00000082748 191 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm24950-201ENSMUST00000082768 191 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm23971-201ENSMUST00000083317 191 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm25581-201ENSMUST00000083410 164 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm23849-201ENSMUST00000083833 191 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm26316-201ENSMUST00000083886 191 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nkx6-1Q99MA9 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.37□□□□□ -1.87
Nkx6-1Q99MA9 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.37□□□□□ -1.87
Nkx6-1Q99MA9 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.37□□□□□ -1.87
Nkx6-1Q99MA9 Gm12550-201ENSMUST00000118478 329 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms